Gene Amir_2930 details

Gene Information

• Locus tag: Amir_2930
• ID: 8327119
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 3381835
• End bp: 3382461
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 644943456
• Product: transcriptional regulator, LuxR family
• Protein accession: YP_003100697
• Protein GI: 256377037
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.757677
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACGA GGATTCCGGT CGCCGTGTAC GCGGCGGACC AGGTGCTGCG CACCGGCGTG 
ACGCACCAGC TCAAGCCGCG CCCCGAGGTG GAGGTCCTGC CGCCCGGCGA GGAGCACCGC 
GCGCGCGTCG CGCTCGTGGT CGTGGACGAG GTGGACGAGC CGTCCGCGCG GCTGCTGCGC 
AGGCTCCAGC GCGCCACGAC CGTGCGCACC GGCGTGGTGG TGAGCCGCTT CGACCAGGAC 
GCGCTGCAGG TCGTCGTCGA CTGCGGCGTG GTGGCCGTGG TGCGCCGGGG CGACGCCGAC 
CAGGACCGGC TGGTGGCGGC GGTGTCGGCG CTGGCGAAGG GCGAGGCGGT GCTGCCCGGC 
GACCTGCTCG GCAAGCTGCT CGACCACGTC AGCCGGTTGC GGCGCAGCGT GCTCGACCCG 
AACGCGCCCA GCCTGTCCAC CCTCACCCCG CGCGAGGCCG ACATGCTGCG GCTGGTGTCC 
GAGGGGTTCG GCACCGCCGA GATCGCGGTG AAGATGTCGT TCTCCGAGCG GACGGTCAAG 
AACGTGCTGC ACGAGGTCAC CACCCGGCTG AACCTGCGCA ACCGCGCGCA CGCGGTCGGG 
TACGTGATGC GCCACGGGCT GATCTGA 

 

Protein sequence

MTTRIPVAVY AADQVLRTGV THQLKPRPEV EVLPPGEEHR ARVALVVVDE VDEPSARLLR 
RLQRATTVRT GVVVSRFDQD ALQVVVDCGV VAVVRRGDAD QDRLVAAVSA LAKGEAVLPG 
DLLGKLLDHV SRLRRSVLDP NAPSLSTLTP READMLRLVS EGFGTAEIAV KMSFSERTVK 
NVLHEVTTRL NLRNRAHAVG YVMRHGLI