| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3808 |
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| Symbol | |
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| ID | 5672172 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4522620 |
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| End bp | 4523426 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641242687 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001508107 |
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| Protein GI | 158315599 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0706178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.229787 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCATC CGGTCCGTGT GCTGGTCCGC ACCAGCGACC CGATCACCCA GGCCGGCCTC
GCCGCCCAAC TGGGTGGCTG CCCCGACATC GAGATCGTCA CCGAACCGTC CGCAGTGCCG
GCGGCGTCGT GGCGGGTTCC CGAACTGGCG GGGGCCGCCG CCGGTCCCGC CGCGGCATCC
CCCGGCGGCC CCCTCGCGGA CCGCGCCGCG GACCGGCGAA CGGCGACCGC GACCGCCGGC
GCCATCGCCG GCTGGCGGCC CGAGCGGACC CCACCCACCG ACCGGGCCGA GGGCGCGCCC
GCCGTCGACG TGGCACTGGT CAGCGCGGAG GCGGTCGACG AGGACACCCT GCGTACCGTC
CGCGAGATCC AGCAGGGTGG CGTGCCGGTC GTGCTGGTCG TCGCCGACCT CGACGGCCAC
GATCTGACGG CGGCCATCGA CGCGGGGGCC GTGGGCCTGC TGCGCCGTGC GAGCGCCACC
CCGGAGACCG TGCTGACGGC GGTGCGTGGA GCAGCCGCGG GCGACGGCTA CCTGCCGCCC
GACCTGCTCG GTCCGCTGCT CAGGCAGGTC CGCCAGGTGT CCACCCAGGT ACTGGCCCCG
CGCGGGCTCA CCTTCTCGGG GCTGTCCGAG CGCGAGTTGA CGGTGCTCCG GCTGGTCAGC
GAGGGGCTCG ACACCCGGGA GATCGGCCGC CGGCTCTGTT ACTCGGAACG GACCGTCAAG
AACGTGCTGC AGGACGTCAC CCGACGGTTC GGGCTGCGTA ACCGTTCCCA CGCGGTGGCC
TACGCCTTCC GACACGGCCT GCTCTGA
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| Protein sequence | MPHPVRVLVR TSDPITQAGL AAQLGGCPDI EIVTEPSAVP AASWRVPELA GAAAGPAAAS
PGGPLADRAA DRRTATATAG AIAGWRPERT PPTDRAEGAP AVDVALVSAE AVDEDTLRTV
REIQQGGVPV VLVVADLDGH DLTAAIDAGA VGLLRRASAT PETVLTAVRG AAAGDGYLPP
DLLGPLLRQV RQVSTQVLAP RGLTFSGLSE RELTVLRLVS EGLDTREIGR RLCYSERTVK
NVLQDVTRRF GLRNRSHAVA YAFRHGLL
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