Gene Mmcs_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_1619 
Symbol 
ID4110455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp1755633 
End bp1756124 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content61% 
IMG OID638030740 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_638786 
Protein GI108798589 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.113726 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATGGACC TTCGGATGAA GCGCGTCGAC GGGATTGAAG CGACCCGAAG ACTCGCCCGT 
CACGAGGCGC CAACGGTTCT CGCCCTGACC ACTTTCAACG AAGACAAGCT GCTGTCCGGG
GCGCTGCGAG CCGGCGTGGC CGGCTTCGTG CTGAAAGATT CGTCTGCCGA GGAGTTGATC
CGTGCGGTGC GGGCAGTCGC CAGAGGTGAT AGCTACCTTG ACCCGGCGGT AACGGCGCGA
GTGCTCAACA CATATCGCCG CGCGCCCGAC ATGCCGCGCG CACTTACATC CGTCGACCTC
ACCACCCGCG AACTGGACGT GCTGCGGCTG ATCGGAAGAG GCTACTCCAA CGCCGAAATT
GCGACCGAAC TCCACATTTC CGAAGTAACA GTCAAGAGTC ACATCGGCCA CATCTTCTTA
AAGCTCGAAT TGCGGGACAG GGCGGCGGCG ATTGTCTATT CCTACGACCA TGGCATCGTT
GCGCCACAGT AG
 
Protein sequence
MMDLRMKRVD GIEATRRLAR HEAPTVLALT TFNEDKLLSG ALRAGVAGFV LKDSSAEELI 
RAVRAVARGD SYLDPAVTAR VLNTYRRAPD MPRALTSVDL TTRELDVLRL IGRGYSNAEI
ATELHISEVT VKSHIGHIFL KLELRDRAAA IVYSYDHGIV APQ