More than 300 homologs were found in PanDaTox collection
for query gene Amir_2952 on replicon NC_013093
Organism: Actinosynnema mirum DSM 43827



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013093  Amir_2952  transcriptional regulator, LuxR family  100 
 
 		 207 aa  403  1e-111  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0281323  n/a   
 
 
-
 
NC_009953  Sare_4852  LuxR family transcriptional regulator  58.94 
 
 		 207 aa  226  2e-58  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0262091 
 
 
-
 
NC_013093  Amir_5376  transcriptional regulator, LuxR family  43.13 
 
 		 213 aa  149  3e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.416669  n/a   
 
 
-
 
NC_014151  Cfla_2255  transcriptional regulator, LuxR family  46.41 
 
 		 207 aa  145  4.0000000000000006e-34  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0543436  hitchhiker  0.000519578 
 
 
-
 
NC_013235  Namu_1891  transcriptional regulator, LuxR family  45.77 
 
 		 230 aa  134  9.999999999999999e-31  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00164243  normal  0.142555 
 
 
-
 
NC_009077  Mjls_0940  response regulator receiver protein  45.24 
 
 		 207 aa  134  9.999999999999999e-31  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_2930  transcriptional regulator, LuxR family  42.86 
 
 		 208 aa  123  2e-27  Actinosynnema mirum DSM 43827  Bacteria  normal  0.757677  n/a   
 
 
-
 
NC_013131  Caci_4395  transcriptional regulator, LuxR family  38.83 
 
 		 208 aa  107  2e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_3808  LuxR family transcriptional regulator  44.71 
 
 		 268 aa  105  6e-22  Frankia sp. EAN1pec  Bacteria  normal  0.0706178  normal  0.229787 
 
 
-
 
NC_009953  Sare_0350  LuxR family transcriptional regulator  37.98 
 
 		 202 aa  99.8  3e-20  Salinispora arenicola CNS-205  Bacteria  normal  0.204823  normal  0.0810275 
 
 
-
 
NC_014151  Cfla_2886  transcriptional regulator, LuxR family  36.52 
 
 		 252 aa  92.4  4e-18  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.197544  normal  0.152863 
 
 
-
 
NC_009565  TBFG_10197  LuxR family two component transcriptional regulator  31.48 
 
 		 232 aa  87.4  1e-16  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_3574  transcriptional regulator, LuxR family  41.95 
 
 		 206 aa  83.2  0.000000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  31.34 
 
 		 208 aa  79.7  0.00000000000003  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_013093  Amir_3573  transcriptional regulator, LuxR family  36.53 
 
 		 189 aa  72.4  0.000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  37.7 
 
 		 218 aa  72.4  0.000000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009953  Sare_0351  LuxR family transcriptional regulator  39.86 
 
 		 195 aa  70.5  0.00000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.147651  normal  0.0771656 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  28.44 
 
 		 220 aa  70.9  0.00000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  37.25 
 
 		 221 aa  70.1  0.00000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  35.71 
 
 		 215 aa  69.7  0.00000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_0279  response regulator receiver protein  37.24 
 
 		 216 aa  69.3  0.00000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_0759  two component LuxR family transcriptional regulator  37.61 
 
 		 217 aa  68.6  0.00000000006  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  41.58 
 
 		 219 aa  68.6  0.00000000007  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_5522  two component LuxR family transcriptional regulator  35.8 
 
 		 219 aa  68.2  0.00000000008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011884  Cyan7425_4561  two component transcriptional regulator, LuxR family  25.69 
 
 		 217 aa  68.2  0.00000000009  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  38.18 
 
 		 234 aa  66.2  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_014210  Ndas_3120  two component transcriptional regulator, LuxR family  36.69 
 
 		 218 aa  66.6  0.0000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.954631  normal  1 
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  42.2 
 
 		 213 aa  65.5  0.0000000005  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_009077  Mjls_1592  two component LuxR family transcriptional regulator  34.39 
 
 		 162 aa  65.1  0.0000000007  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_1619  two component LuxR family transcriptional regulator  34.39 
 
 		 163 aa  64.7  0.0000000008  Mycobacterium sp. MCS  Bacteria  normal  0.113726  n/a   
 
 
-
 
NC_008705  Mkms_1644  two component LuxR family transcriptional regulator  34.39 
 
 		 163 aa  64.7  0.0000000008  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  34.9 
 
 		 222 aa  64.7  0.0000000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  28.91 
 
 		 213 aa  63.9  0.000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.999676 
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  36.54 
 
 		 242 aa  64.3  0.000000001  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  39.09 
 
 		 234 aa  63.9  0.000000001  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013441  Gbro_3475  response regulator receiver  35.25 
 
 		 228 aa  63.9  0.000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.849127  n/a   
 
 
-
 
NC_009767  Rcas_1579  two component LuxR family transcriptional regulator  30.13 
 
 		 242 aa  64.3  0.000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_1477  two component transcriptional regulator, LuxR family  42.27 
 
 		 234 aa  63.9  0.000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.594471  normal  1 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  31.54 
 
 		 217 aa  63.9  0.000000002  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  47.83 
 
 		 216 aa  63.2  0.000000003  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_1989  two component transcriptional regulator, LuxR family  41.94 
 
 		 229 aa  63.2  0.000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  37.36 
 
 		 213 aa  63.2  0.000000003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013526  Tter_2446  transcriptional regulator, LuxR family  33.99 
 
 		 188 aa  63.2  0.000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  34.31 
 
 		 213 aa  62.8  0.000000004  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  39.42 
 
 		 221 aa  62.4  0.000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  32.84 
 
 		 218 aa  62.4  0.000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_4860  two component LuxR family transcriptional regulator  37.74 
 
 		 219 aa  62.8  0.000000004  Salinispora arenicola CNS-205  Bacteria  normal  0.452521  normal  0.0798716 
 
 
-
 
NC_013947  Snas_4871  two component transcriptional regulator, LuxR family  32.47 
 
 		 222 aa  62.4  0.000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.134443  normal  0.31614 
 
 
-
 
NC_009338  Mflv_3579  two component LuxR family transcriptional regulator  34.11 
 
 		 217 aa  62.8  0.000000004  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.393396  normal  0.0540104 
 
 
-
 
NC_009380  Strop_2458  response regulator receiver  37.74 
 
 		 220 aa  62.4  0.000000004  Salinispora tropica CNB-440  Bacteria  normal  0.0554598  normal  1 
 
 
-
 
NC_013595  Sros_4468  response regulator receiver protein  38.32 
 
 		 219 aa  62.8  0.000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0876299  normal  0.32237 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  29.55 
 
 		 222 aa  62.8  0.000000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_013159  Svir_39200  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.27 
 
 		 218 aa  62.4  0.000000005  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.254077 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  31.48 
 
 		 213 aa  62.4  0.000000005  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  39.78 
 
 		 216 aa  62.4  0.000000005  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  38.68 
 
 		 234 aa  62.4  0.000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  32.38 
 
 		 208 aa  62.4  0.000000005  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  34.91 
 
 		 213 aa  62  0.000000006  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  33.81 
 
 		 239 aa  62  0.000000006  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  29.68 
 
 		 237 aa  62  0.000000006  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_007777  Francci3_0765  two component LuxR family transcriptional regulator  29.68 
 
 		 237 aa  61.6  0.000000007  Frankia sp. CcI3  Bacteria  normal  0.272345  normal  1 
 
 
-
 
NC_013131  Caci_6057  two component transcriptional regulator, LuxR family  34.81 
 
 		 217 aa  62  0.000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  36.45 
 
 		 303 aa  62  0.000000007  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.887336 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  36.26 
 
 		 213 aa  62  0.000000007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  25.46 
 
 		 215 aa  61.6  0.000000008  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  25.46 
 
 		 215 aa  61.6  0.000000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  25.46 
 
 		 215 aa  61.6  0.000000008  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  25.46 
 
 		 215 aa  61.6  0.000000008  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_2525  two component transcriptional regulator, LuxR family  33.71 
 
 		 215 aa  61.6  0.000000008  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  33.94 
 
 		 207 aa  61.6  0.000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_2599  two component transcriptional regulator, LuxR family  38.68 
 
 		 211 aa  61.6  0.000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  25.46 
 
 		 215 aa  61.6  0.000000008  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  35.92 
 
 		 214 aa  61.2  0.000000009  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  hitchhiker  0.0084678 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  27.48 
 
 		 215 aa  61.2  0.000000009  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  36.31 
 
 		 227 aa  61.2  0.00000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_008726  Mvan_2836  two component LuxR family transcriptional regulator  34.11 
 
 		 207 aa  61.2  0.00000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.644859  normal  1 
 
 
-
 
NC_013947  Snas_3359  two component transcriptional regulator, LuxR family  38.32 
 
 		 219 aa  60.1  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0172663  normal  1 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  34.29 
 
 		 231 aa  60.1  0.00000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  31.45 
 
 		 226 aa  60.5  0.00000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_007511  Bcep18194_B1611  two component LuxR family transcriptional regulator  33.64 
 
 		 215 aa  60.1  0.00000002  Burkholderia sp. 383  Bacteria  normal  0.650425  normal  0.234442 
 
 
-
 
NC_014210  Ndas_4652  two component transcriptional regulator, LuxR family  52.46 
 
 		 219 aa  60.8  0.00000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0949639  normal  1 
 
 
-
 
NC_009523  RoseRS_0938  two component LuxR family transcriptional regulator  29.26 
 
 		 242 aa  60.5  0.00000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  48.33 
 
 		 217 aa  60.5  0.00000002  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  31.82 
 
 		 225 aa  60.1  0.00000003  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_014158  Tpau_0354  two component transcriptional regulator, LuxR family  37.61 
 
 		 222 aa  59.7  0.00000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  37.14 
 
 		 238 aa  59.7  0.00000003  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_011992  Dtpsy_1772  two component transcriptional regulator, LuxR family  33.57 
 
 		 262 aa  59.3  0.00000003  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  32.08 
 
 		 218 aa  59.7  0.00000003  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_3380  two component LuxR family transcriptional regulator  32.58 
 
 		 259 aa  59.7  0.00000003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.277634 
 
 
-
 
NC_010718  Nther_0692  two component transcriptional regulator, LuxR family  36.08 
 
 		 213 aa  59.3  0.00000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  36.11 
 
 		 253 aa  59.3  0.00000004  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_3511  two component LuxR family transcriptional regulator  33.12 
 
 		 221 aa  58.9  0.00000005  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0444635 
 
 
-
 
NC_008781  Pnap_1851  two component LuxR family transcriptional regulator  29.13 
 
 		 262 aa  58.9  0.00000005  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.467917  normal  0.53175 
 
 
-
 
NC_009380  Strop_3279  response regulator receiver  33.12 
 
 		 221 aa  58.9  0.00000005  Salinispora tropica CNB-440  Bacteria  normal  0.97215  normal  1 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  41.94 
 
 		 236 aa  58.9  0.00000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  28.84 
 
 		 225 aa  58.9  0.00000005  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  31.08 
 
 		 225 aa  58.5  0.00000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  35.96 
 
 		 216 aa  58.5  0.00000006  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  25.11 
 
 		 215 aa  58.5  0.00000007  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6284  two component transcriptional regulator, LuxR family  32.26 
 
 		 217 aa  58.5  0.00000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
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