More than 300 homologs were found in PanDaTox collection
for query gene Tpet_0931 on replicon NC_009486
Organism: Thermotoga petrophila RKU-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010483  TRQ2_0953  cell envelope-related transcriptional attenuator  97.3 
 
 
370 aa  721    Thermotoga sp. RQ2  Bacteria  normal  0.0121722  n/a   
 
 
-
 
NC_009486  Tpet_0931  cell envelope-related transcriptional attenuator  100 
 
 
397 aa  791    Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.00105119  n/a   
 
 
-
 
NC_009718  Fnod_1774  cell envelope-related transcriptional attenuator  37.02 
 
 
400 aa  234  3e-60  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0243051  n/a   
 
 
-
 
NC_009616  Tmel_1561  cell envelope-related transcriptional attenuator  35.37 
 
 
387 aa  228  2e-58  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0905  cell envelope-related transcriptional attenuator  40 
 
 
388 aa  148  2.0000000000000003e-34  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  27.54 
 
 
445 aa  109  1e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  31.99 
 
 
419 aa  105  1e-21  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  32.91 
 
 
319 aa  103  4e-21  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  33.77 
 
 
337 aa  100  4e-20  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_011830  Dhaf_3430  cell envelope-related transcriptional attenuator  31.37 
 
 
439 aa  100  5e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0225853  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  30.68 
 
 
411 aa  100  7e-20  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  28.19 
 
 
405 aa  99  1e-19  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  30.13 
 
 
308 aa  98.2  2e-19  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  30.18 
 
 
453 aa  98.2  2e-19  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_011884  Cyan7425_3856  cell envelope-related transcriptional attenuator  32.08 
 
 
451 aa  97.4  4e-19  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2090  cell envelope-related transcriptional attenuator  27.99 
 
 
417 aa  95.5  1e-18  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_1641  cell envelope-related function transcriptional attenuator  30.49 
 
 
314 aa  92.8  1e-17  Synechococcus sp. CC9605  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_1857  cell envelope-related transcriptional attenuator  36.17 
 
 
456 aa  92  2e-17  Trichodesmium erythraeum IMS101  Bacteria  normal  0.046941  normal 
 
 
-
 
NC_008820  P9303_09711  membrane bound transcriptional regulator-like protein  31.1 
 
 
298 aa  91.3  3e-17  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal 
 
 
-
 
NC_009487  SaurJH9_1423  cell envelope-related transcriptional attenuator  32.5 
 
 
327 aa  90.5  5e-17  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.302612  n/a   
 
 
-
 
NC_009632  SaurJH1_1451  transcription attenuator LytR  32.5 
 
 
327 aa  90.5  5e-17  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  34.4 
 
 
414 aa  89.7  8e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  32.7 
 
 
383 aa  88.2  2e-16  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP0932  transcriptional regulator, putative  34.3 
 
 
329 aa  88.2  3e-16  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  33.49 
 
 
375 aa  87.8  3e-16  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_011729  PCC7424_2873  cell envelope-related transcriptional attenuator  33.5 
 
 
475 aa  87.8  3e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  33.49 
 
 
375 aa  87.4  4e-16  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  33.49 
 
 
375 aa  87.4  4e-16  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  33.49 
 
 
375 aa  87.4  4e-16  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  33.49 
 
 
375 aa  87.4  4e-16  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  31.74 
 
 
418 aa  87  5e-16  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_008025  Dgeo_1232  cell envelope-related transcriptional attenuator  28 
 
 
377 aa  86.7  6e-16  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.113674  normal 
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  33.49 
 
 
377 aa  86.7  7e-16  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  33.01 
 
 
377 aa  86.3  8e-16  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  31.47 
 
 
344 aa  85.5  0.000000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0754  cell envelope-related transcriptional attenuator  31.79 
 
 
419 aa  85.9  0.000000000000001  Meiothermus silvanus DSM 9946  Bacteria  normal  0.0493984  hitchhiker  0.0069249 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  32.66 
 
 
380 aa  84.7  0.000000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  31.82 
 
 
372 aa  85.1  0.000000000000002  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  32.27 
 
 
374 aa  85.5  0.000000000000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  33.72 
 
 
426 aa  85.1  0.000000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_007413  Ava_0411  cell envelope-like transcriptional attenuator  32.67 
 
 
472 aa  83.6  0.000000000000006  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.207765 
 
 
-
 
NC_009674  Bcer98_0638  cell envelope-related transcriptional attenuator  27.69 
 
 
294 aa  83.6  0.000000000000006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  33.81 
 
 
374 aa  83.2  0.000000000000008  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  31.82 
 
 
471 aa  82.8  0.00000000000001  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_2604  cell envelope-related transcriptional attenuator  33.33 
 
 
471 aa  82.4  0.00000000000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.22991 
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  31.11 
 
 
502 aa  81.6  0.00000000000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_014212  Mesil_1572  cell envelope-related transcriptional attenuator  33.56 
 
 
384 aa  81.3  0.00000000000003  Meiothermus silvanus DSM 9946  Bacteria  hitchhiker  0.0072424  normal  0.757675 
 
 
-
 
NC_014210  Ndas_3877  cell envelope-related transcriptional attenuator  31.75 
 
 
497 aa  80.9  0.00000000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_2377  cell envelope-related transcriptional attenuator  29.56 
 
 
344 aa  80.9  0.00000000000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.00145979  normal 
 
 
-
 
NC_013093  Amir_6814  cell envelope-related transcriptional attenuator  27.83 
 
 
1336 aa  80.5  0.00000000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_1360  cell envelope-related transcriptional attenuator  32.54 
 
 
436 aa  80.5  0.00000000000005  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  32.56 
 
 
509 aa  80.1  0.00000000000006  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_008528  OEOE_1732  transcriptional regulator  29.57 
 
 
296 aa  79.3  0.0000000000001  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  28.75 
 
 
443 aa  78.2  0.0000000000002  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  31.7 
 
 
492 aa  78.6  0.0000000000002  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3892  cell envelope-related transcriptional attenuator  32.16 
 
 
453 aa  77  0.0000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2282  cell envelope-related transcriptional attenuator  30.41 
 
 
389 aa  76.6  0.0000000000006  Meiothermus ruber DSM 1279  Bacteria  normal  0.072814  hitchhiker  0.000000103578 
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  28.64 
 
 
335 aa  76.6  0.0000000000006  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_014165  Tbis_0717  cell envelope-related transcriptional attenuator  33.33 
 
 
504 aa  76.6  0.0000000000007  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.0100935 
 
 
-
 
NC_011726  PCC8801_2524  cell envelope-related transcriptional attenuator  31.7 
 
 
492 aa  76.6  0.0000000000008  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A5387  membrane-bound transcriptional regulator LytR  35.5 
 
 
299 aa  76.6  0.0000000000008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  28.83 
 
 
353 aa  76.3  0.0000000000009  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_013161  Cyan8802_1138  cell envelope-related transcriptional attenuator  29.61 
 
 
481 aa  75.9  0.000000000001  Cyanothece sp. PCC 8802  Bacteria  normal  0.441684  normal 
 
 
-
 
NC_011726  PCC8801_1109  cell envelope-related transcriptional attenuator  29.61 
 
 
481 aa  75.5  0.000000000001  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_1208  cell envelope-related transcriptional attenuator  31.55 
 
 
330 aa  75.9  0.000000000001  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000721845  n/a   
 
 
-
 
NC_012034  Athe_1252  cell envelope-related transcriptional attenuator  32.74 
 
 
403 aa  75.5  0.000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000000912522  n/a   
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  25.97 
 
 
563 aa  74.7  0.000000000002  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013235  Namu_4529  cell envelope-related transcriptional attenuator  27.59 
 
 
365 aa  74.7  0.000000000003  Nakamurella multipartita DSM 44233  Bacteria  normal  0.25457  normal 
 
 
-
 
NC_009767  Rcas_0369  cell envelope-related transcriptional attenuator  25.88 
 
 
356 aa  74.7  0.000000000003  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.117824  normal  0.3088 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  28.64 
 
 
407 aa  73.9  0.000000000004  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_005945  BAS5115  membrane-bound transcriptional regulator LytR  31.44 
 
 
303 aa  74.3  0.000000000004  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5436  membrane-bound transcriptional regulator LytR  30.48 
 
 
302 aa  73.9  0.000000000004  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4961  membrane-bound transcriptional regulator LytR  33.73 
 
 
303 aa  73.9  0.000000000004  Bacillus cereus E33L  Bacteria  normal  0.0205697  n/a   
 
 
-
 
NC_007530  GBAA_5506  membrane-bound transcriptional regulator LytR  31.44 
 
 
303 aa  74.3  0.000000000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.00691653  n/a   
 
 
-
 
NC_003909  BCE_5383  membrane-bound transcriptional regulator LytR  34.32 
 
 
302 aa  73.9  0.000000000005  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  25.56 
 
 
512 aa  73.9  0.000000000005  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_010001  Cphy_2557  cell envelope-related transcriptional attenuator  29.63 
 
 
263 aa  73.9  0.000000000005  Clostridium phytofermentans ISDg  Bacteria  normal  0.0157477  n/a   
 
 
-
 
NC_008262  CPR_2090  transcription regulator LytR-like protein  28.62 
 
 
437 aa  73.2  0.000000000007  Clostridium perfringens SM101  Bacteria  normal  0.853394  n/a   
 
 
-
 
NC_008261  CPF_0280  putative transcriptional regulator  27.88 
 
 
340 aa  73.2  0.000000000008  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3901  cell envelope-related transcriptional attenuator  31.13 
 
 
407 aa  73.2  0.000000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0120062 
 
 
-
 
NC_010184  BcerKBAB4_5058  membrane-bound transcriptional regulator LytR  29.52 
 
 
304 aa  72.8  0.00000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_1715  transcriptional regulator  25.4 
 
 
374 aa  72.8  0.00000000001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  hitchhiker  0.00565214 
 
 
-
 
NC_005957  BT9727_4947  membrane-bound transcriptional regulator LytR  28.77 
 
 
304 aa  72  0.00000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0889022  n/a   
 
 
-
 
NC_011773  BCAH820_5355  membrane-bound transcriptional regulator LytR  32.95 
 
 
303 aa  72  0.00000000002  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  27.39 
 
 
406 aa  71.6  0.00000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  29.82 
 
 
329 aa  72  0.00000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_013411  GYMC61_3385  membrane-bound transcriptional regulator LytR  28.57 
 
 
313 aa  71.6  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3272  membrane-bound transcriptional regulator LytR  32.57 
 
 
310 aa  71.2  0.00000000003  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000512755  n/a   
 
 
-
 
NC_009921  Franean1_6827  cell envelope-related transcriptional attenuator  30.69 
 
 
516 aa  71.2  0.00000000003  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0271  cell envelope-related function transcriptional attenuator  28.77 
 
 
340 aa  71.2  0.00000000003  Clostridium perfringens SM101  Bacteria  normal  0.968761  n/a   
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  30.14 
 
 
505 aa  71.2  0.00000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_008530  LGAS_0174  transcriptional regulator  30.43 
 
 
374 aa  70.9  0.00000000004  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.0565386  hitchhiker  0.0000000000000158467 
 
 
-
 
NC_008530  LGAS_1157  transcriptional regulator  26.67 
 
 
334 aa  70.9  0.00000000004  Lactobacillus gasseri ATCC 33323  Bacteria  unclonable  0.000000000000266671  hitchhiker  6.72858e-19 
 
 
-
 
NC_008261  CPF_2378  cell envelope-related function transcriptional attenuator  29.74 
 
 
437 aa  70.5  0.00000000005  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0983623  n/a   
 
 
-
 
NC_013093  Amir_6349  cell envelope-related transcriptional attenuator  26.77 
 
 
410 aa  70.1  0.00000000006  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1881  cell envelope-related function transcriptional attenuator  30.19 
 
 
460 aa  70.1  0.00000000006  Clostridium perfringens SM101  Bacteria  normal  0.723477  n/a   
 
 
-
 
NC_008261  CPF_2170  cell envelope-related function transcriptional attenuator  29.58 
 
 
473 aa  69.7  0.00000000008  Clostridium perfringens ATCC 13124  Bacteria  normal  0.582429  n/a   
 
 
-
 
NC_008148  Rxyl_0152  cell envelope-related transcriptional attenuator  28.73 
 
 
271 aa  69.7  0.00000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  29.36 
 
 
333 aa  69.3  0.0000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  29.36 
 
 
335 aa  69.3  0.0000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
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