More than 300 homologs were found in PanDaTox collection
for query gene Spea_1733 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009901  Spea_1733  two component LuxR family transcriptional regulator  100 
 
 		 210 aa  427  1e-119  Shewanella pealeana ATCC 700345  Bacteria  normal  0.137963  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  39.02 
 
 		 212 aa  134  7.000000000000001e-31  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  37.14 
 
 		 218 aa  134  7.000000000000001e-31  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal  1 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  36.1 
 
 		 213 aa  132  3e-30  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008009  Acid345_4067  two component LuxR family transcriptional regulator  37 
 
 		 233 aa  132  3.9999999999999996e-30  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.836498  normal  0.141664 
 
 
-
 
NC_008009  Acid345_4064  two component LuxR family transcriptional regulator  33.18 
 
 		 213 aa  132  5e-30  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.368666  normal  0.0789055 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  33.49 
 
 		 218 aa  130  1.0000000000000001e-29  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  35.68 
 
 		 211 aa  129  3e-29  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_009439  Pmen_1563  two component LuxR family transcriptional regulator  33.01 
 
 		 214 aa  126  3e-28  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.241819 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  34.93 
 
 		 216 aa  126  3e-28  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  33.66 
 
 		 213 aa  125  6e-28  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  34.17 
 
 		 206 aa  124  1e-27  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  35.68 
 
 		 206 aa  124  1e-27  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  35.78 
 
 		 212 aa  123  2e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  0.265772 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  34.45 
 
 		 206 aa  124  2e-27  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  34.34 
 
 		 208 aa  122  4e-27  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  34.98 
 
 		 213 aa  121  6e-27  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  33.17 
 
 		 209 aa  120  1.9999999999999998e-26  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  34.63 
 
 		 216 aa  119  3e-26  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  32.02 
 
 		 214 aa  119  3e-26  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_011666  Msil_2019  two component transcriptional regulator, LuxR family  31.58 
 
 		 223 aa  117  9.999999999999999e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  33.66 
 
 		 214 aa  117  9.999999999999999e-26  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  33.97 
 
 		 216 aa  116  3e-25  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_011769  DvMF_1021  two component transcriptional regulator, LuxR family  34.15 
 
 		 216 aa  116  3e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.794365 
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  35.2 
 
 		 220 aa  115  5e-25  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  32.86 
 
 		 216 aa  115  6.9999999999999995e-25  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  30.39 
 
 		 212 aa  114  8.999999999999998e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010571  Oter_0829  two component LuxR family transcriptional regulator  33.49 
 
 		 219 aa  113  2.0000000000000002e-24  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0121621 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  29.85 
 
 		 207 aa  113  2.0000000000000002e-24  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_010501  PputW619_1643  two component LuxR family transcriptional regulator  32.68 
 
 		 219 aa  113  2.0000000000000002e-24  Pseudomonas putida W619  Bacteria  normal  0.118638  normal  1 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  30.48 
 
 		 238 aa  113  3e-24  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.500036 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  32.38 
 
 		 215 aa  112  3e-24  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_007974  Rmet_4715  Two component LuxR family transcriptional regulator  30.81 
 
 		 264 aa  112  4.0000000000000004e-24  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008391  Bamb_5330  two component LuxR family transcriptional regulator  30.77 
 
 		 215 aa  112  4.0000000000000004e-24  Burkholderia ambifaria AMMD  Bacteria  normal  0.858277  normal  1 
 
 
-
 
NC_013739  Cwoe_4976  two component transcriptional regulator, LuxR family  29.27 
 
 		 218 aa  112  5e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.289575  normal  0.034027 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  32.99 
 
 		 206 aa  112  5e-24  Shewanella woodyi ATCC 51908  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  31.84 
 
 		 214 aa  112  5e-24  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  31.47 
 
 		 214 aa  112  6e-24  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009455  DehaBAV1_0945  two component LuxR family transcriptional regulator  32.24 
 
 		 232 aa  111  6e-24  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.5 
 
 		 212 aa  111  8.000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  31.73 
 
 		 214 aa  111  9e-24  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  29.65 
 
 		 208 aa  111  9e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  1  normal  0.0637899 
 
 
-
 
NC_002936  DET1063  LuxR family DNA-binding response regulator  31.78 
 
 		 232 aa  110  1.0000000000000001e-23  Dehalococcoides ethenogenes 195  Bacteria  normal  0.815436  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  30.81 
 
 		 217 aa  110  1.0000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  30.14 
 
 		 209 aa  110  1.0000000000000001e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  27.54 
 
 		 207 aa  110  1.0000000000000001e-23  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  35.15 
 
 		 215 aa  110  2.0000000000000002e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  34.69 
 
 		 209 aa  110  2.0000000000000002e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_010625  Bphy_6469  two component LuxR family transcriptional regulator  31.68 
 
 		 213 aa  109  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.53826 
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  34.69 
 
 		 209 aa  110  2.0000000000000002e-23  Yersinia pestis Angola  Bacteria  normal  1  normal  0.0858473 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  31.75 
 
 		 223 aa  110  2.0000000000000002e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  33.01 
 
 		 221 aa  110  2.0000000000000002e-23  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_013730  Slin_0700  two component transcriptional regulator, LuxR family  30.28 
 
 		 218 aa  110  2.0000000000000002e-23  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00980919  normal  0.316207 
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  32.06 
 
 		 214 aa  110  2.0000000000000002e-23  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  34.69 
 
 		 209 aa  110  2.0000000000000002e-23  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  29.76 
 
 		 219 aa  110  2.0000000000000002e-23  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.869411 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  32.02 
 
 		 213 aa  110  2.0000000000000002e-23  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010515  Bcenmc03_4563  two component LuxR family transcriptional regulator  30.69 
 
 		 214 aa  109  3e-23  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  0.0560765 
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  30.77 
 
 		 233 aa  109  3e-23  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_008061  Bcen_5187  two component LuxR family transcriptional regulator  30.69 
 
 		 214 aa  109  3e-23  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  31.12 
 
 		 214 aa  109  3e-23  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_008543  Bcen2424_5672  two component LuxR family transcriptional regulator  30.69 
 
 		 214 aa  109  3e-23  Burkholderia cenocepacia HI2424  Bacteria  normal  1  hitchhiker  0.00685344 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  30.24 
 
 		 219 aa  108  4.0000000000000004e-23  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_008709  Ping_1192  transcriptional regulator of LuxR family protein  29.56 
 
 		 214 aa  108  4.0000000000000004e-23  Psychromonas ingrahamii 37  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  34.93 
 
 		 218 aa  108  4.0000000000000004e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  34.27 
 
 		 217 aa  109  4.0000000000000004e-23  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  34.27 
 
 		 217 aa  109  4.0000000000000004e-23  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010552  BamMC406_5498  two component LuxR family transcriptional regulator  30.69 
 
 		 214 aa  108  5e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  1  hitchhiker  0.00509748 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  30.24 
 
 		 219 aa  108  5e-23  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_008391  Bamb_4946  two component LuxR family transcriptional regulator  30.69 
 
 		 214 aa  108  5e-23  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.0203352 
 
 
-
 
NC_013552  DhcVS_934  DNA-binding response regulator, LuxR family  31.31 
 
 		 232 aa  108  5e-23  Dehalococcoides sp. VS  Bacteria  normal  0.717523  n/a   
 
 
-
 
NC_011369  Rleg2_1389  two component transcriptional regulator, LuxR family  31.25 
 
 		 206 aa  108  5e-23  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.744509  normal  1 
 
 
-
 
NC_007951  Bxe_A1850  two component LuxR family transcriptional regulator  30.14 
 
 		 216 aa  108  7.000000000000001e-23  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010676  Bphyt_6314  two component transcriptional regulator, LuxR family  30.14 
 
 		 216 aa  108  7.000000000000001e-23  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_12543  Transcriptional regulator  33.5 
 
 		 207 aa  108  8.000000000000001e-23  Croceibacter atlanticus HTCC2559  Bacteria  normal  0.204025  n/a   
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  30.95 
 
 		 215 aa  108  8.000000000000001e-23  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012853  Rleg_5633  two component transcriptional regulator, LuxR family  30.85 
 
 		 203 aa  107  9.000000000000001e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.603295  normal  1 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  27.92 
 
 		 220 aa  107  9.000000000000001e-23  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  0.929677 
 
 
-
 
NC_009656  PSPA7_0745  putative two-component response regulator  29.61 
 
 		 210 aa  107  9.000000000000001e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  0.536324  n/a   
 
 
-
 
NC_004578  PSPTO_0560  DNA-binding response regulator, LuxR family  28.71 
 
 		 209 aa  107  9.000000000000001e-23  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  29.58 
 
 		 215 aa  108  9.000000000000001e-23  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  28.77 
 
 		 223 aa  107  9.000000000000001e-23  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_010676  Bphyt_4476  two component transcriptional regulator, LuxR family  32.99 
 
 		 215 aa  107  1e-22  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  34.93 
 
 		 235 aa  107  1e-22  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_007511  Bcep18194_B0026  two component LuxR family transcriptional regulator  30.2 
 
 		 214 aa  107  1e-22  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II2335  LuxR family DNA-binding response regulator  30.54 
 
 		 215 aa  107  1e-22  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  33.18 
 
 		 215 aa  107  1e-22  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  33.18 
 
 		 215 aa  107  1e-22  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  33.18 
 
 		 215 aa  107  1e-22  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010465  YPK_3919  two component LuxR family transcriptional regulator  32.2 
 
 		 210 aa  107  2e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_007511  Bcep18194_B2520  two component LuxR family transcriptional regulator  30.24 
 
 		 214 aa  107  2e-22  Burkholderia sp. 383  Bacteria  normal  0.943169  normal  0.310419 
 
 
-
 
NC_009708  YpsIP31758_3833  putative DNA-binding response regulator EsrB  32.2 
 
 		 210 aa  107  2e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2496  two component LuxR family transcriptional regulator  29.29 
 
 		 212 aa  106  2e-22  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.996792 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  31.68 
 
 		 217 aa  106  2e-22  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  30.54 
 
 		 213 aa  107  2e-22  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010159  YpAngola_A3945  putative DNA-binding response regulator EsrB  32.2 
 
 		 210 aa  106  2e-22  Yersinia pestis Angola  Bacteria  normal  0.0480381  normal  1 
 
 
-
 
NC_008463  PA14_07840  putative two-component response regulator  29.13 
 
 		 210 aa  106  2e-22  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.0171986 
 
 
-
 
NC_008726  Mvan_1646  two component LuxR family transcriptional regulator  32.06 
 
 		 219 aa  107  2e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  0.92254 
 
 
-
 
NC_010515  Bcenmc03_3925  two component LuxR family transcriptional regulator  29.21 
 
 		 215 aa  106  3e-22  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  30.95 
 
 		 213 aa  106  3e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
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