More than 300 homologs were found in PanDaTox collection
for query gene Rpic_4795 on replicon NC_010678
Organism: Ralstonia pickettii 12J



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010678  Rpic_4795  two component transcriptional regulator, LuxR family  100 
 
 		 221 aa  437  9.999999999999999e-123  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.180506 
 
 
-
 
NC_012857  Rpic12D_3718  two component transcriptional regulator, LuxR family  99.55 
 
 		 231 aa  436  1e-121  Ralstonia pickettii 12D  Bacteria  normal  0.0262455  normal  0.571903 
 
 
-
 
NC_003296  RSp0338  negative regulator of exopolysaccharide production transcription regulator protein  83.19 
 
 		 236 aa  376  1e-103  Ralstonia solanacearum GMI1000  Bacteria  normal  0.104039  normal  1 
 
 
-
 
NC_003295  RSc1185  transcription regulator protein  54.72 
 
 		 222 aa  226  2e-58  Ralstonia solanacearum GMI1000  Bacteria  normal  0.124825  normal  0.600184 
 
 
-
 
NC_010682  Rpic_1028  two component transcriptional regulator, LuxR family  53.33 
 
 		 222 aa  221  6e-57  Ralstonia pickettii 12J  Bacteria  normal  0.146412  normal  0.260968 
 
 
-
 
NC_012856  Rpic12D_1120  two component transcriptional regulator, LuxR family  53.33 
 
 		 219 aa  217  1e-55  Ralstonia pickettii 12D  Bacteria  normal  0.0994252  normal  0.118956 
 
 
-
 
NC_003296  RS03679  transcription regulator protein  45.39 
 
 		 299 aa  114  1.0000000000000001e-24  Ralstonia solanacearum GMI1000  Bacteria  decreased coverage  0.0000906887  normal  0.0907157 
 
 
-
 
NC_012857  Rpic12D_3767  two component transcriptional regulator, LuxR family  41.94 
 
 		 303 aa  111  1.0000000000000001e-23  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010678  Rpic_4844  two component transcriptional regulator, LuxR family  41.94 
 
 		 303 aa  111  1.0000000000000001e-23  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  37.06 
 
 		 227 aa  103  2e-21  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  33.5 
 
 		 224 aa  96.3  3e-19  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_007974  Rmet_5831  LuxR family transcriptional regulator  34.47 
 
 		 276 aa  94  2e-18  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5380  regulatory protein, LuxR  53.01 
 
 		 315 aa  90.5  2e-17  Ralstonia eutropha JMP134  Bacteria  normal  0.869493  n/a   
 
 
-
 
NC_007974  Rmet_5861  LuxR family transcriptional regulator  59.15 
 
 		 309 aa  90.5  2e-17  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.971396 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  30.05 
 
 		 221 aa  89  6e-17  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5353  regulatory protein, LuxR  61.54 
 
 		 330 aa  87.4  2e-16  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  29.61 
 
 		 212 aa  85.5  6e-16  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  36.05 
 
 		 216 aa  83.6  0.000000000000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2603  two component LuxR family transcriptional regulator  30.37 
 
 		 226 aa  81.6  0.000000000000008  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0876088  n/a   
 
 
-
 
NC_011884  Cyan7425_1929  two component transcriptional regulator, LuxR family  30.35 
 
 		 209 aa  80.9  0.00000000000001  Cyanothece sp. PCC 7425  Bacteria  normal  0.142226  normal  1 
 
 
-
 
NC_009719  Plav_1690  two component LuxR family transcriptional regulator  33.53 
 
 		 215 aa  81.3  0.00000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.104312 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  33.96 
 
 		 224 aa  80.1  0.00000000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  29 
 
 		 227 aa  80.1  0.00000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_2039  two component LuxR family transcriptional regulator  33.17 
 
 		 212 aa  79.7  0.00000000000003  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  32.16 
 
 		 210 aa  78.2  0.00000000000009  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  34.88 
 
 		 239 aa  78.2  0.00000000000009  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  31.22 
 
 		 209 aa  77.8  0.0000000000001  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  31.4 
 
 		 231 aa  77.8  0.0000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  30.15 
 
 		 220 aa  76.6  0.0000000000003  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  29.69 
 
 		 230 aa  75.9  0.0000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  29.9 
 
 		 232 aa  75.5  0.0000000000005  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  30.65 
 
 		 224 aa  75.5  0.0000000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  31.61 
 
 		 212 aa  75.1  0.0000000000007  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  35.25 
 
 		 214 aa  73.6  0.000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  29.5 
 
 		 223 aa  73.6  0.000000000002  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.211294 
 
 
-
 
NC_011662  Tmz1t_3355  two component transcriptional regulator, LuxR family  30.85 
 
 		 208 aa  73.2  0.000000000003  Thauera sp. MZ1T  Bacteria  normal  0.687232  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  28.9 
 
 		 225 aa  73.2  0.000000000003  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  28.02 
 
 		 218 aa  73.2  0.000000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  28.04 
 
 		 235 aa  73.6  0.000000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  30.93 
 
 		 218 aa  73.2  0.000000000003  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  33.52 
 
 		 224 aa  72.8  0.000000000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  1  normal  0.0588074 
 
 
-
 
NC_007974  Rmet_5646  putative LuxR family transcriptional regulator  58.46 
 
 		 231 aa  72.8  0.000000000004  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.387707 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  33.52 
 
 		 225 aa  72.8  0.000000000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  33.52 
 
 		 224 aa  72.4  0.000000000005  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal  1 
 
 
-
 
NC_009972  Haur_4341  two component LuxR family transcriptional regulator  30.23 
 
 		 343 aa  72.4  0.000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  30.17 
 
 		 221 aa  72  0.000000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  25.48 
 
 		 208 aa  72  0.000000000007  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_011989  Avi_0584  two component response regulator  32.72 
 
 		 215 aa  71.6  0.000000000008  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  28.5 
 
 		 218 aa  70.9  0.00000000001  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  30.67 
 
 		 227 aa  71.2  0.00000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  30.46 
 
 		 221 aa  71.2  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  30.39 
 
 		 228 aa  71.2  0.00000000001  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  33.77 
 
 		 209 aa  70.9  0.00000000001  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  30.89 
 
 		 221 aa  70.9  0.00000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  28.82 
 
 		 219 aa  71.6  0.00000000001  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  28.5 
 
 		 218 aa  70.9  0.00000000001  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  30.92 
 
 		 209 aa  70.5  0.00000000002  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  29.67 
 
 		 215 aa  70.1  0.00000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  31.55 
 
 		 209 aa  70.5  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_007498  Pcar_0978  two component signal transduction response regulator  29.34 
 
 		 223 aa  70.5  0.00000000002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  0.0402933  n/a   
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  30.72 
 
 		 217 aa  70.9  0.00000000002  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal  1 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  31.18 
 
 		 224 aa  70.9  0.00000000002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  28.02 
 
 		 220 aa  70.5  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  34.29 
 
 		 213 aa  69.7  0.00000000003  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  29.55 
 
 		 224 aa  70.1  0.00000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  29.47 
 
 		 239 aa  69.7  0.00000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  32.02 
 
 		 207 aa  70.1  0.00000000003  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  28.57 
 
 		 236 aa  70.1  0.00000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_013161  Cyan8802_1954  two component transcriptional regulator, LuxR family  28.72 
 
 		 221 aa  69.3  0.00000000004  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.682063 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  30.65 
 
 		 216 aa  69.7  0.00000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_012880  Dd703_1766  transcriptional regulator NarL  30.29 
 
 		 216 aa  69.3  0.00000000004  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_011726  PCC8801_1927  two component transcriptional regulator, LuxR family  28.72 
 
 		 221 aa  69.3  0.00000000004  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011205  SeD_A3981  putative transcriptional regulator  31.31 
 
 		 200 aa  69.3  0.00000000004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  0.347336 
 
 
-
 
NC_013093  Amir_1617  two component transcriptional regulator, LuxR family  33.13 
 
 		 214 aa  69.3  0.00000000005  Actinosynnema mirum DSM 43827  Bacteria  normal  0.321528  n/a   
 
 
-
 
NC_009092  Shew_0842  two component LuxR family transcriptional regulator  27.81 
 
 		 209 aa  69.3  0.00000000005  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00000336278  normal  1 
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  29.12 
 
 		 215 aa  69.3  0.00000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B3813  putative transcriptional regulator  31.31 
 
 		 200 aa  69.3  0.00000000005  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011083  SeHA_C3921  putative transcriptional regulator  31.31 
 
 		 200 aa  69.3  0.00000000005  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011094  SeSA_A3800  putative transcriptional regulator  31.31 
 
 		 200 aa  69.3  0.00000000005  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009524  PsycPRwf_0663  two component LuxR family transcriptional regulator  26.4 
 
 		 219 aa  68.9  0.00000000005  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  33.09 
 
 		 213 aa  68.9  0.00000000006  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  31.82 
 
 		 223 aa  68.9  0.00000000006  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  30.18 
 
 		 215 aa  68.6  0.00000000007  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008009  Acid345_3748  two component LuxR family transcriptional regulator  29.02 
 
 		 211 aa  68.6  0.00000000007  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.107866  normal  1 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  32.37 
 
 		 209 aa  68.6  0.00000000007  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  29.45 
 
 		 238 aa  68.6  0.00000000007  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_1766  two component LuxR family transcriptional regulator  33.94 
 
 		 203 aa  68.6  0.00000000008  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00488071  normal  1 
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  30 
 
 		 222 aa  68.6  0.00000000008  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  27.14 
 
 		 212 aa  68.6  0.00000000008  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_009430  Rsph17025_4184  hypothetical protein  27.47 
 
 		 207 aa  68.6  0.00000000008  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.400045  normal  0.380291 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  27.54 
 
 		 218 aa  68.2  0.00000000009  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1134  two component LuxR family transcriptional regulator  29.41 
 
 		 213 aa  68.2  0.00000000009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013172  Bfae_20460  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.27 
 
 		 229 aa  68.2  0.0000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0212792  n/a   
 
 
-
 
NC_009620  Smed_4826  two component LuxR family transcriptional regulator  31.91 
 
 		 267 aa  67.4  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.847801  normal  0.0520322 
 
 
-
 
NC_007952  Bxe_B1813  two component LuxR family transcriptional regulator  26.52 
 
 		 249 aa  67.8  0.0000000001  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.172477 
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  31.71 
 
 		 209 aa  68.2  0.0000000001  Vibrio sp. Ex25  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  29.89 
 
 		 219 aa  68.2  0.0000000001  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  29.24 
 
 		 207 aa  67.4  0.0000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  28.32 
 
 		 214 aa  68.2  0.0000000001  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  32.61 
 
 		 216 aa  68.2  0.0000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal  1 
 
 
-
 
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