Gene Haur_4341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_4341 
Symbol 
ID5736201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp5549383 
End bp5550414 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content53% 
IMG OID641281502 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001547101 
Protein GI159900854 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTCA ATGGCGAGCG TCAGATTCGA ATTGTGGTAG CCGATGATCA TGCGGTAGTG 
CGAGCTGGCA TTTCAACCGC ACTAAGCGAT TTGCCCAATG TTGAAATTGT GGCCGAGGTC 
GGCGATGGGC CTGGGGTTTT AGCCGCGCTC GATCTACGGC CAGATGCCTT GGTGATTGAT 
GTGAGCATGC CGCAATTCGA GCCGTTGCAA ACAATTCGCC AAATTCGCAT GCATTATCCA 
CAGCTCAAAA TTCTCGTAGT CAGCGCCTAT GATGATGATG TGTATGTGCA AGGGTTGTTG 
CAAGCAGGAG TCGATGGCTA CCAACTCAAA GATCAACCTT TGGCTGATAT TCGTTTGGCC 
CTGCAACGGG TGCTAGCTGG CGAACGCTGG GTTTGCACAC CCTTGCTTTC GAAGTTGATG 
CGTGGCGTGC CCGTGGTTGA AACTGGCCTG ACCCCGCGCC AACGTGAATT GTTGTGGTGT 
TTGCAGCAGG GCGATGATAA CCATGCAATT GCCCGCCGCA TTGGCCTAAG CGTCAAAACC 
GTTGAAAATC ATCTTACGCG GCTGTATCGC CAAATTGGGG TGCAAAGTCG GCTTGAAGCG 
GTACATTATG CGGCCCAACA CCCACAATTG CCGATGATGC CAACCAGCAA CCAAGTGATT 
GCCCCCAGCC AAGCGCTAAG CGTGTTGATT GTTGATGATA ATTTGCGCTA TCGTCAACAC 
GTTAGTCGCA TGATTAGCAA AATGCAGCCC AATTGTGCTG TGGTTGAAGC CGCTCACCAA 
ACTGAAGCTA TGGCAGCAAT TAGCCAACGC TCGCCTGATT TGGCCTTGGT TGATGTGGTT 
TTAGGCGATG AAGATGGCAT TAGTTGCGCC GCCCAAATTA AGCAACAATC GCCCAAGACC 
CGCGTGCTGC TGGTCAGCGC CTACCCCGAC CGCGAGTTTC ATCGGCGCGG TTTGGCGGTC 
GGGGCAGTTG CCTTGCTCGA TAAAAAAGAC CTTGATGCGG CGGCGCTGCG CTTGTTGTTG 
GAAGATGTGT GA
 
Protein sequence
MQLNGERQIR IVVADDHAVV RAGISTALSD LPNVEIVAEV GDGPGVLAAL DLRPDALVID 
VSMPQFEPLQ TIRQIRMHYP QLKILVVSAY DDDVYVQGLL QAGVDGYQLK DQPLADIRLA 
LQRVLAGERW VCTPLLSKLM RGVPVVETGL TPRQRELLWC LQQGDDNHAI ARRIGLSVKT 
VENHLTRLYR QIGVQSRLEA VHYAAQHPQL PMMPTSNQVI APSQALSVLI VDDNLRYRQH 
VSRMISKMQP NCAVVEAAHQ TEAMAAISQR SPDLALVDVV LGDEDGISCA AQIKQQSPKT 
RVLLVSAYPD REFHRRGLAV GAVALLDKKD LDAAALRLLL EDV