Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RS03679 |
Symbol | RSp0285 |
ID | 1222417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003296 |
Strand | + |
Start bp | 368825 |
End bp | 369724 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637240145 |
Product | transcription regulator protein |
Protein accession | NP_521846 |
Protein GI | 17548506 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000906887 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0907157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCTG TTCTGCTGGA GAATCATCCG CTGCTGCGCG CCGGGCTTGC GCAAGTGCTC GCGCATCCCA CGCTGGGCCT GGAGGTCAGC GCGCCCGAGC AGCCCCATGC GCCGCTCGAT CCCGCCGATC TGCTGGTGGT CGGCGTTCAC GATGCGGACG TCCCGCTCGA TGCCGCGCGG CTGCGTGATC TCATCGCGCA GAGCACGCCG CGCCACGTCG TGGTCCTGGC CGCGCAGGTG ACGGCCGAGG AGGCGCATGC CGTCATGGCG TGCGGTGCCG ACGCCTATGT CGCCAAGACG CAGCCGACCG GGGTGCTGCT GGCCACGCTG CAGCTCGTGC TGGCCGGCGG CCAGGCCTAT CCCGCCTTGA TGCCGCGCGC CGCGCAGGAC GTCGCTGCCG GGCCGCCGGC CATGAATGCC GCCGAGGCCG CGCAGCGGCT CAATGTCTCG CAGCGCCAGT ACGAGGTGCT GGTGTTGCTC TCGCGCGGGC ACTCGGTCAA GGGCGTGGGT CGCCTGCTGG GCATTTCGGA AGCCACCGTC AAGACGCACG CCTGCACGCT CTACCGGCGC CTGAACGTGC GCAACAAGAG CGAGGCCGTG TACGCCGCCA TGCGGCTGGG CATTCCGCTG GAGCTGCAAG GCAATCCGGC GATGGCCCCG GCCGGCGACC GCTTGCCCGA GGCGGTTGCG CGCGCAGACG TGCCGCCGCG CGTCGCTATC GAAGCGGTGG AAGCCGTGGA GGCGCCGGCG CGCGTGCCGT CCCGTCCCGC TGTCGGCGAG CATGCCGCCG AGACGCGCTG GGCGGCCATG ACGCGCGCCT TCGGCTCGAC GGCCGCGCCC AAGGGCGGGC GGATGCCGGT GCGTGTCGTC AATGGCGCGC ATCGGCACGG CATGGGGTGA
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Protein sequence | MKAVLLENHP LLRAGLAQVL AHPTLGLEVS APEQPHAPLD PADLLVVGVH DADVPLDAAR LRDLIAQSTP RHVVVLAAQV TAEEAHAVMA CGADAYVAKT QPTGVLLATL QLVLAGGQAY PALMPRAAQD VAAGPPAMNA AEAAQRLNVS QRQYEVLVLL SRGHSVKGVG RLLGISEATV KTHACTLYRR LNVRNKSEAV YAAMRLGIPL ELQGNPAMAP AGDRLPEAVA RADVPPRVAI EAVEAVEAPA RVPSRPAVGE HAAETRWAAM TRAFGSTAAP KGGRMPVRVV NGAHRHGMG
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