| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3981 |
|---|
| Symbol | |
|---|
| ID | 6874479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 3819243 |
|---|
| End bp | 3819845 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642786938 |
|---|
| Product | putative transcriptional regulator |
|---|
| Protein accession | YP_002217566 |
|---|
| Protein GI | 198245542 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 0.347336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAA TCATGTTTGA CAGGCAGTCA ATATTTATTC ATGGAATGAA AATCAGTTTG
CAGCAGCACA TTCCAGGAAT AAGTATCCAG AGTGTCGGTC AGGCAGAAGA ACTCTGGCAA
AAAATAGAAA GCGCGCCGGA TGCGCTGGTC ATGCTGGATA GCGGCCTGGA TGCTGAATTT
TGCCGCGAGG TGTTACAAAG AACCGTGCAG CAATTTCCGG AGGTGAAGAT TATTATCACG
GCGATGGATG GCAGTCAAAA GTGGCTGCAT GAAGTCATGC AATTTAACGT TCAGGCCGTG
GTGCCACGCG ATTCTGATGC CGAAACCTTT GTCCTTGCGC TCAATGCTGT CGCTCGCGGG
ATGATGTTTT TACCGGGGGA TTGGTTAAAT TCAACGGAGC TGGAGTCCCG TGATATAAAA
GCGTTAAGCG CCCGCCAGCG GGAAATTTTG CAGATGCTTG CCGCAGGAGA ATCAAATAAA
CAAATTGGGC GGGCGTTAAA TATTAGTACC GGGACGGTTA AAGCGCATCT GGAGTCGCTT
TACCGGCGGC TGGATGTAAA AAATCGTACC CAGGCCGCCA TGATGTTAAA TGAATCGAAT
TAA
|
|---|
| Protein sequence | MQVIMFDRQS IFIHGMKISL QQHIPGISIQ SVGQAEELWQ KIESAPDALV MLDSGLDAEF
CREVLQRTVQ QFPEVKIIIT AMDGSQKWLH EVMQFNVQAV VPRDSDAETF VLALNAVARG
MMFLPGDWLN STELESRDIK ALSARQREIL QMLAAGESNK QIGRALNIST GTVKAHLESL
YRRLDVKNRT QAAMMLNESN
|
|---|
| |