More than 300 homologs were found in PanDaTox collection
for query gene Rleg2_5740 on replicon NC_011366
Organism: Rhizobium leguminosarum bv. trifolii WSM2304



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011366  Rleg2_5740  two component transcriptional regulator, LuxR family  100 
 
 
240 aa  490  9.999999999999999e-139  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.714581  normal 
 
 
-
 
NC_012848  Rleg_5411  two component transcriptional regulator, LuxR family  98.33 
 
 
240 aa  484  1e-136  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009621  Smed_5322  two component LuxR family transcriptional regulator  90.3 
 
 
239 aa  443  1e-123  Sinorhizobium medicae WSM419  Bacteria  normal  0.205756  normal  0.864466 
 
 
-
 
NC_009668  Oant_3907  two component LuxR family transcriptional regulator  81.86 
 
 
248 aa  399  9.999999999999999e-111  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_3086  two component signal transduction response regulator  42.8 
 
 
249 aa  190  2e-47  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  31.25 
 
 
215 aa  85.9  6e-16  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6211  response regulator receiver protein  29.74 
 
 
239 aa  85.1  9e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.377169 
 
 
-
 
NC_009674  Bcer98_1160  two component LuxR family transcriptional regulator  29.87 
 
 
210 aa  83.2  0.000000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  33.66 
 
 
228 aa  81.6  0.000000000000009  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  30.5 
 
 
218 aa  80.9  0.00000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  29.8 
 
 
210 aa  80.1  0.00000000000003  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  30.56 
 
 
212 aa  79.3  0.00000000000005  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  28.89 
 
 
216 aa  78.6  0.00000000000008  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  32.72 
 
 
221 aa  78.6  0.00000000000008  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_011146  Gbem_0451  two component transcriptional regulator, LuxR family  30.39 
 
 
216 aa  77.8  0.0000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  27.69 
 
 
208 aa  77.8  0.0000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0759  two component LuxR family transcriptional regulator  28.22 
 
 
217 aa  77.8  0.0000000000001  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.00000000356105  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  29.8 
 
 
210 aa  77  0.0000000000002  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_007644  Moth_0975  two component LuxR family transcriptional regulator  29.5 
 
 
222 aa  77.4  0.0000000000002  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_011772  BCG9842_B3849  DNA-binding response regulator  29.8 
 
 
210 aa  77.4  0.0000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000308683  hitchhiker  0.000000000350245 
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  29.8 
 
 
210 aa  77  0.0000000000003  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  29.8 
 
 
210 aa  77  0.0000000000003  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  29.8 
 
 
210 aa  77  0.0000000000003  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  29.8 
 
 
210 aa  77  0.0000000000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  29.8 
 
 
210 aa  77  0.0000000000003  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  29.8 
 
 
210 aa  77  0.0000000000003  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_011773  BCAH820_1531  DNA-binding response regulator  29.8 
 
 
210 aa  76.6  0.0000000000003  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  8.64189e-24 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  29.52 
 
 
206 aa  77  0.0000000000003  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  31.4 
 
 
218 aa  76.3  0.0000000000005  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_0467  two component transcriptional regulator, LuxR family  29.9 
 
 
216 aa  75.5  0.0000000000006  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000507383 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  29.65 
 
 
213 aa  75.9  0.0000000000006  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  29.8 
 
 
213 aa  75.5  0.0000000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_21850  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  28.57 
 
 
222 aa  74.3  0.000000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  0.118113  n/a   
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  26.77 
 
 
216 aa  73.6  0.000000000003  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  30.26 
 
 
212 aa  72.8  0.000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_4132  response regulator receiver  29.06 
 
 
235 aa  72.8  0.000000000004  Salinispora tropica CNB-440  Bacteria  normal  0.232221  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  28.86 
 
 
216 aa  73.2  0.000000000004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  29.9 
 
 
213 aa  73.2  0.000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal 
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  27.54 
 
 
220 aa  72.8  0.000000000005  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  30.69 
 
 
218 aa  72.4  0.000000000006  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  28.08 
 
 
224 aa  72.4  0.000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  28.79 
 
 
232 aa  72  0.000000000007  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  28.21 
 
 
212 aa  72  0.000000000007  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.265772 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  30.26 
 
 
228 aa  72  0.000000000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  28.79 
 
 
232 aa  71.6  0.00000000001  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  29.06 
 
 
224 aa  71.2  0.00000000001  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  32.82 
 
 
208 aa  71.2  0.00000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_007908  Rfer_0894  two component LuxR family transcriptional regulator  30.39 
 
 
217 aa  71.2  0.00000000001  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_1691  two component LuxR family transcriptional regulator  29.65 
 
 
208 aa  71.6  0.00000000001  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.0637899 
 
 
-
 
NC_011831  Cagg_2579  two component transcriptional regulator, LuxR family  28.29 
 
 
352 aa  71.6  0.00000000001  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal  0.0445779 
 
 
-
 
NC_009901  Spea_2299  two component LuxR family transcriptional regulator  23.53 
 
 
221 aa  70.9  0.00000000002  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  29.61 
 
 
234 aa  70.5  0.00000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_003295  RSc2312  two-component response regulator transcription regulator protein  32.37 
 
 
238 aa  70.9  0.00000000002  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.500036 
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  28.21 
 
 
213 aa  70.9  0.00000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  26.4 
 
 
221 aa  70.5  0.00000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  29.06 
 
 
223 aa  70.5  0.00000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_010001  Cphy_1240  two component LuxR family transcriptional regulator  31.53 
 
 
207 aa  70.5  0.00000000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3357  two component LuxR family transcriptional regulator  31.72 
 
 
238 aa  70.5  0.00000000002  Opitutus terrae PB90-1  Bacteria  normal  0.1255  normal 
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  27.78 
 
 
232 aa  70.5  0.00000000002  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_002967  TDE0149  DNA-binding response regulator  30.1 
 
 
201 aa  70.1  0.00000000003  Treponema denticola ATCC 35405  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0080  two component LuxR family transcriptional regulator  27.69 
 
 
212 aa  70.1  0.00000000003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  27.72 
 
 
217 aa  70.1  0.00000000003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0029  two component LuxR family transcriptional regulator  28.24 
 
 
214 aa  70.1  0.00000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.317943  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  27.72 
 
 
217 aa  70.1  0.00000000003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  24.76 
 
 
217 aa  69.7  0.00000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  26.15 
 
 
217 aa  69.7  0.00000000004  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  27.15 
 
 
209 aa  69.7  0.00000000004  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  29.06 
 
 
211 aa  69.7  0.00000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  27.31 
 
 
214 aa  69.7  0.00000000004  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  29.21 
 
 
226 aa  69.3  0.00000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal 
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  28.29 
 
 
220 aa  69.3  0.00000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  30.65 
 
 
216 aa  69.3  0.00000000005  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  29.56 
 
 
210 aa  69.3  0.00000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  29.41 
 
 
218 aa  69.3  0.00000000005  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  28.63 
 
 
209 aa  69.3  0.00000000005  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  28 
 
 
217 aa  68.9  0.00000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.482316 
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  26.53 
 
 
209 aa  68.9  0.00000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0730  two component LuxR family transcriptional regulator  27.88 
 
 
214 aa  68.9  0.00000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.47186  normal 
 
 
-
 
NC_007410  Ava_B0209  two component LuxR family transcriptional regulator  26.5 
 
 
223 aa  68.9  0.00000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  27.57 
 
 
215 aa  68.9  0.00000000007  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal 
 
 
-
 
NC_009565  TBFG_13154  two component system transcriptional regulatory protein DevR  30.65 
 
 
217 aa  68.6  0.00000000008  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  33 
 
 
227 aa  68.6  0.00000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  29.19 
 
 
236 aa  68.6  0.00000000008  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_010627  Bphy_7761  two component LuxR family transcriptional regulator  29.38 
 
 
213 aa  68.6  0.00000000008  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  29.52 
 
 
207 aa  68.6  0.00000000009  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013530  Xcel_2717  two component transcriptional regulator, LuxR family  29.27 
 
 
223 aa  68.6  0.00000000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  29.41 
 
 
224 aa  68.2  0.0000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  29.41 
 
 
224 aa  68.2  0.0000000001  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  30 
 
 
224 aa  68.6  0.0000000001  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  27.32 
 
 
241 aa  68.2  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_008463  PA14_38900  putative two-component response regulator  27.86 
 
 
225 aa  68.2  0.0000000001  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  27.23 
 
 
216 aa  68.6  0.0000000001  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  25.12 
 
 
225 aa  68.2  0.0000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_011831  Cagg_3668  two component transcriptional regulator, LuxR family  28.64 
 
 
213 aa  67  0.0000000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  30.65 
 
 
215 aa  67.4  0.0000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  31.03 
 
 
223 aa  67.4  0.0000000002  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_2188  two component transcriptional regulator, LuxR family  28.35 
 
 
220 aa  67  0.0000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.546074  normal 
 
 
-
 
NC_010571  Oter_3231  two component LuxR family transcriptional regulator  27.98 
 
 
209 aa  67  0.0000000002  Opitutus terrae PB90-1  Bacteria  normal  0.229823  normal  0.0283688 
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  30.65 
 
 
215 aa  67.4  0.0000000002  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  30.65 
 
 
215 aa  67.4  0.0000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
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