More than 300 homologs were found in PanDaTox collection
for query gene Cphy_1240 on replicon NC_010001
Organism: Clostridium phytofermentans ISDg



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010001  Cphy_1240  two component LuxR family transcriptional regulator  100 
 
 		 207 aa  416  9.999999999999999e-116  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE0149  DNA-binding response regulator  53.66 
 
 		 201 aa  224  7e-58  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013204  Elen_0565  two component transcriptional regulator, LuxR family  50.95 
 
 		 213 aa  211  4.9999999999999996e-54  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013170  Ccur_10690  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  44.76 
 
 		 215 aa  192  2e-48  Cryptobacterium curtum DSM 15641  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010816  BLD_0642  putative response regulator  45.79 
 
 		 217 aa  176  3e-43  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  42.38 
 
 		 216 aa  156  2e-37  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  39.32 
 
 		 219 aa  154  6e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_002967  TDE2324  DNA-binding response regulator  43.06 
 
 		 217 aa  154  1e-36  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  39.15 
 
 		 220 aa  154  1e-36  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  35.1 
 
 		 217 aa  150  2e-35  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  37.07 
 
 		 211 aa  149  2e-35  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  39.42 
 
 		 208 aa  149  2e-35  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  36.28 
 
 		 222 aa  150  2e-35  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  36.62 
 
 		 223 aa  149  3e-35  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_010184  BcerKBAB4_1656  two component LuxR family transcriptional regulator  40.49 
 
 		 224 aa  149  4e-35  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.145564  n/a   
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  37.62 
 
 		 218 aa  148  4e-35  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_2804  two component transcriptional regulator, LuxR family  38.68 
 
 		 216 aa  148  5e-35  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.995251  normal  0.311692 
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  36.79 
 
 		 234 aa  148  6e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  37.2 
 
 		 218 aa  147  1.0000000000000001e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1059  two component transcriptional regulator, LuxR family  40.98 
 
 		 221 aa  147  1.0000000000000001e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  37.5 
 
 		 226 aa  147  1.0000000000000001e-34  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_005957  BT9727_1637  response regulator  40 
 
 		 212 aa  146  2.0000000000000003e-34  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00000588398  n/a   
 
 
-
 
NC_012034  Athe_2627  two component transcriptional regulator, LuxR family  38.42 
 
 		 211 aa  147  2.0000000000000003e-34  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3538  DNA-binding response regulator, LuxR family  40 
 
 		 223 aa  146  2.0000000000000003e-34  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A1802  DNA-binding response regulator, LuxR family  40 
 
 		 229 aa  146  2.0000000000000003e-34  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS1659  LuxR family DNA-binding response regulator  40 
 
 		 212 aa  146  3e-34  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1791  LuxR family DNA-binding response regulator  40 
 
 		 212 aa  146  3e-34  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.276817  n/a   
 
 
-
 
NC_013174  Jden_2514  two component transcriptional regulator, LuxR family  39.44 
 
 		 230 aa  145  3e-34  Jonesia denitrificans DSM 20603  Bacteria  normal  0.135771  normal  0.887193 
 
 
-
 
NC_010571  Oter_1284  two component LuxR family transcriptional regulator  41.21 
 
 		 209 aa  145  3e-34  Opitutus terrae PB90-1  Bacteria  normal  0.479266  normal  1 
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  35.41 
 
 		 218 aa  145  3e-34  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_003909  BCE_1863  LuxR family DNA-binding response regulator  40 
 
 		 218 aa  145  5e-34  Bacillus cereus ATCC 10987  Bacteria  normal  0.345514  n/a   
 
 
-
 
NC_011773  BCAH820_1839  DNA-binding response regulator, LuxR family  40 
 
 		 212 aa  145  5e-34  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_011658  BCAH187_A1913  DNA-binding response regulator, LuxR family  40 
 
 		 212 aa  145  5e-34  Bacillus cereus AH187  Bacteria  normal  0.605645  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  35.81 
 
 		 224 aa  145  6e-34  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  36.11 
 
 		 225 aa  144  8.000000000000001e-34  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  35.24 
 
 		 220 aa  144  1e-33  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  35.27 
 
 		 218 aa  144  1e-33  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  37.09 
 
 		 239 aa  144  1e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_6963  two component transcriptional regulator, LuxR family  35.81 
 
 		 225 aa  143  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.029709  normal  1 
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  37.32 
 
 		 226 aa  143  2e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  39.71 
 
 		 217 aa  142  4e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  37.38 
 
 		 217 aa  142  4e-33  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK1606  response regulator  39.51 
 
 		 212 aa  141  6e-33  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_7301  response regulator receiver protein  36.15 
 
 		 220 aa  141  9e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  38.79 
 
 		 253 aa  140  9e-33  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  35.55 
 
 		 221 aa  140  9.999999999999999e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_010718  Nther_0747  two component transcriptional regulator, LuxR family  33.63 
 
 		 232 aa  140  9.999999999999999e-33  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  0.643618  normal  0.38139 
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  35.32 
 
 		 226 aa  140  9.999999999999999e-33  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  36.32 
 
 		 234 aa  140  1.9999999999999998e-32  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  36.19 
 
 		 224 aa  139  1.9999999999999998e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_011071  Smal_1099  two component transcriptional regulator, LuxR family  37.98 
 
 		 213 aa  140  1.9999999999999998e-32  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  36.92 
 
 		 226 aa  139  3e-32  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013947  Snas_3040  two component transcriptional regulator, LuxR family  38.07 
 
 		 224 aa  139  3e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0154763  normal  1 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  35.98 
 
 		 224 aa  139  3.9999999999999997e-32  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006274  BCZK3023  response regulator  39.72 
 
 		 597 aa  139  3.9999999999999997e-32  Bacillus cereus E33L  Bacteria  decreased coverage  0.000011368  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  34.91 
 
 		 220 aa  139  3.9999999999999997e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013595  Sros_3251  response regulator receiver protein  34.76 
 
 		 221 aa  138  4.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0793449  normal  1 
 
 
-
 
NC_011831  Cagg_1769  two component transcriptional regulator, LuxR family  33.33 
 
 		 219 aa  138  4.999999999999999e-32  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.221401  normal  0.0578747 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  35.92 
 
 		 214 aa  138  4.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_013947  Snas_5788  two component transcriptional regulator, LuxR family  35.1 
 
 		 214 aa  138  4.999999999999999e-32  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.785726 
 
 
-
 
NC_013172  Bfae_25060  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.62 
 
 		 222 aa  138  6e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  0.444591  n/a   
 
 
-
 
NC_010001  Cphy_0080  two component LuxR family transcriptional regulator  37.25 
 
 		 212 aa  138  6e-32  Clostridium phytofermentans ISDg  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0956  two component transcriptional regulator, LuxR family  38.39 
 
 		 221 aa  137  7.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_7161  two component LuxR family transcriptional regulator  35.24 
 
 		 225 aa  137  7.999999999999999e-32  Frankia sp. EAN1pec  Bacteria  normal  0.0588186  normal  0.118819 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  35.27 
 
 		 217 aa  137  7.999999999999999e-32  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  36.89 
 
 		 209 aa  137  8.999999999999999e-32  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  37.5 
 
 		 213 aa  137  1e-31  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_1618  two component transcriptional regulator, LuxR family  36.49 
 
 		 220 aa  137  1e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3998  response regulator receiver protein  36.19 
 
 		 233 aa  137  1e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.363745  normal  0.263649 
 
 
-
 
NC_012669  Bcav_4002  two component transcriptional regulator, LuxR family  36.02 
 
 		 222 aa  137  1e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.947887  normal  0.770727 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  34.86 
 
 		 226 aa  137  1e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  35.75 
 
 		 216 aa  137  1e-31  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  37.21 
 
 		 216 aa  137  1e-31  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013235  Namu_0480  two component transcriptional regulator, LuxR family  34.78 
 
 		 214 aa  136  2e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008527  LACR_0967  DNA-binding response regulator  39.81 
 
 		 209 aa  136  2e-31  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.598364  n/a   
 
 
-
 
NC_009921  Franean1_3185  two component LuxR family transcriptional regulator  34.11 
 
 		 223 aa  136  2e-31  Frankia sp. EAN1pec  Bacteria  normal  0.704721  normal  1 
 
 
-
 
NC_013739  Cwoe_0356  two component transcriptional regulator, LuxR family  36.62 
 
 		 220 aa  135  3.0000000000000003e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.165726  normal  0.0985551 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  35.81 
 
 		 227 aa  136  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  35.51 
 
 		 241 aa  135  4e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_013947  Snas_1903  two component transcriptional regulator, LuxR family  36.02 
 
 		 225 aa  135  4e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.202425  normal  0.182857 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  35.29 
 
 		 217 aa  135  4e-31  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_013411  GYMC61_1316  two component transcriptional regulator, LuxR family  37.68 
 
 		 210 aa  135  4e-31  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  37.25 
 
 		 227 aa  135  4e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  33.33 
 
 		 230 aa  135  4e-31  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0553  response regulator receiver protein  35.58 
 
 		 213 aa  135  5e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.82888  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  33.49 
 
 		 219 aa  135  5e-31  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_3988  two component transcriptional regulator, LuxR family  34.76 
 
 		 228 aa  135  5e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.0354189  normal  0.736565 
 
 
-
 
NC_011725  BCB4264_A1495  DNA-binding response regulator  36.41 
 
 		 210 aa  135  6.0000000000000005e-31  Bacillus cereus B4264  Bacteria  unclonable  0.0000174821  n/a   
 
 
-
 
NC_008699  Noca_3488  response regulator receiver  36.15 
 
 		 229 aa  135  6.0000000000000005e-31  Nocardioides sp. JS614  Bacteria  normal  0.920048  n/a   
 
 
-
 
NC_008699  Noca_3643  two component LuxR family transcriptional regulator  35.44 
 
 		 215 aa  135  6.0000000000000005e-31  Nocardioides sp. JS614  Bacteria  normal  0.516516  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  32.68 
 
 		 216 aa  134  6.0000000000000005e-31  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_1633  two component transcriptional regulator, LuxR family  37.98 
 
 		 241 aa  135  6.0000000000000005e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.457155  n/a   
 
 
-
 
NC_003909  BCE_1563  DNA-binding response regulator  36.41 
 
 		 210 aa  134  7.000000000000001e-31  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.0000000942452  n/a   
 
 
-
 
NC_005945  BAS1348  DNA-binding response regulator  36.41 
 
 		 210 aa  134  7.000000000000001e-31  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.0000440829  n/a   
 
 
-
 
NC_005957  BT9727_1322  response regulator  36.41 
 
 		 210 aa  134  7.000000000000001e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  7.30192e-17  n/a   
 
 
-
 
NC_007530  GBAA_1457  DNA-binding response regulator  36.41 
 
 		 210 aa  134  7.000000000000001e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.0000538049  n/a   
 
 
-
 
NC_011658  BCAH187_A1601  DNA-binding response regulator  36.41 
 
 		 210 aa  134  7.000000000000001e-31  Bacillus cereus AH187  Bacteria  unclonable  0.00000000136266  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1363  two component LuxR family transcriptional regulator  36.41 
 
 		 210 aa  134  7.000000000000001e-31  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.0039551  n/a   
 
 
-
 
NC_006274  BCZK1321  response regulator  36.41 
 
 		 210 aa  134  8e-31  Bacillus cereus E33L  Bacteria  hitchhiker  0.00000332221  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  36.67 
 
 		 226 aa  134  8e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
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