Gene Noca_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3488 
Symbol 
ID4595587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3698119 
End bp3698808 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content72% 
IMG OID639778096 
Productresponse regulator receiver 
Protein accessionYP_924675 
Protein GI119717710 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.920048 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC CGACCGCCGA GCAGCCGATC CGGGTGCTGC TGGTCGACGA CCAAGAGCTG 
TTCCGCGAGG GCGTGCGGGT GATCGTGGAC GCCCAGGAGG GCATGGGCGT CGTCGGGACC
GCGGCGGACG GGCTCGAGGC CGTCGCGCTG GTCGAGGAGC TCGAGCCGGA CGTGGTGCTG
ATGGACATCC GGATGCCGGA CATGGACGGT GTGGAGGCGA CCCGGCAGAT CTTCCTGCCC
GAGCGGGCCG CGCGCCGTCA GCGGCCGGTC CGGGTGGTGG TGCTCACGAC CTTCAACCTC
GACGACCGGG CCGCGACCGC GATCCGCCAC GGCGCCAGCG GCTTCCTGCT CAAGGGCACC
ACGCCGGTGA TGCTCGCCGA CGCGATCCGC ACCGTGCACG CCGGCAACGC GGTGCTCGCG
CCCACCGACC TGACGACGCT GCTCGACGGC CGGCTCCGCT CCCAGGCGCC CCTGCCGCCG
GCGTACCTCA CGCTCACCGA CAAGGAGCGT GAGGTCTTCA CCGCAGTGGC CCGCGGGCTG
TCCAACACCG AGATCGCCGG CCTGGTGTTC CTGAGCGAGT CGACCGTGAA GACCCACGTG
GGCGCGATCC TGCGCAAGCT CGGGCTGCGT GACCGGGTGC AGATCGTGGT CTTCGCCTAC
GAGCACGGAC TCGTGGGCGA GCGCTCCTAG
 
Protein sequence
MSEPTAEQPI RVLLVDDQEL FREGVRVIVD AQEGMGVVGT AADGLEAVAL VEELEPDVVL 
MDIRMPDMDG VEATRQIFLP ERAARRQRPV RVVVLTTFNL DDRAATAIRH GASGFLLKGT
TPVMLADAIR TVHAGNAVLA PTDLTTLLDG RLRSQAPLPP AYLTLTDKER EVFTAVARGL
SNTEIAGLVF LSESTVKTHV GAILRKLGLR DRVQIVVFAY EHGLVGERS