Gene Cphy_1240 details

Gene Information

• Locus tag: Cphy_1240
• ID: 5744846
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium phytofermentans ISDg
• Kingdom: Bacteria
• Replicon accession: NC_010001
• Strand: +
• Start bp: 1566225
• End bp: 1566848
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 641292346
• Product: two component LuxR family transcriptional regulator
• Protein accession: YP_001558357
• Protein GI: 160879389
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAATTG TAATAGTTGA TGATGACCGT TTGGTATGTT CATCTTTAAA GGTTATCTTA 
GAAATGGATT CTGAGATTAA AGTAGAAGCT ATCGGAAATG ATGGGCGTGA AGCCATTACT 
CTATATGAGA AGTATACTCC TGATGTGCTA TTAATGGACA TTCGTATGTC TACAATGAGC 
GGCATTGATG CAGCAGAAAA AATATTAGTG AAACATAAAG ATGCTAAGAT ATTATTTTTA 
ACAACATTTT CAGATGATGA ATATATTGTG AAGGCATTAA AGATTGGCGC AAAAGGATAT 
TTGTTAAAAC AAGACTATGA TAGTATACAG CCTGCGTTAA AGGCGGTTTC CATGGGTCAA 
AGTGTATTTG GTTCAGATGT TATAACCAAG TTACCAGACT TAATGCAGAA GAAAAAGGAA 
TTCCCTTATG GGGCATATCA GCTAACAAAG AAGGAATACG AACTTCTAAC TATGGTCGCG 
GAAGGACTTA GTAACAAAGA AATCGCAGAT GTCATGTTCT TAAGTGAAGG TACAGTTAGG 
AATTATTTAA GTAATTTGAT GTTGAAACTA GATGTTAGGG ATCGTACACA GGCAGCTATT 
TTTTATTATA AGCAGATGCA GTGA 

 

Protein sequence

MRIVIVDDDR LVCSSLKVIL EMDSEIKVEA IGNDGREAIT LYEKYTPDVL LMDIRMSTMS 
GIDAAEKILV KHKDAKILFL TTFSDDEYIV KALKIGAKGY LLKQDYDSIQ PALKAVSMGQ 
SVFGSDVITK LPDLMQKKKE FPYGAYQLTK KEYELLTMVA EGLSNKEIAD VMFLSEGTVR 
NYLSNLMLKL DVRDRTQAAI FYYKQMQ