More than 300 homologs were found in PanDaTox collection
for query gene Pmen_4451 on replicon NC_009439
Organism: Pseudomonas mendocina ymp



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009439  Pmen_4451  methyl-accepting chemotaxis sensory transducer  100 
 
 
531 aa  1060    Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  52.63 
 
 
529 aa  505  9.999999999999999e-143  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  42.48 
 
 
518 aa  415  1e-114  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_1324  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.91 
 
 
523 aa  410  1e-113  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.587106  n/a   
 
 
-
 
NC_009901  Spea_1860  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.28 
 
 
524 aa  387  1e-106  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3770  aerotaxis receptor Aer  43.86 
 
 
521 aa  380  1e-104  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_44300  aerotaxis receptor Aer  43.29 
 
 
521 aa  375  1e-102  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0580  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.59 
 
 
521 aa  373  1e-102  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0413099 
 
 
-
 
NC_002947  PP_2111  aerotaxis receptor Aer-2  43.62 
 
 
521 aa  369  1e-101  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0317394 
 
 
-
 
NC_009512  Pput_3628  methyl-accepting chemotaxis sensory transducer  43.81 
 
 
521 aa  370  1e-101  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_1630  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  43.54 
 
 
521 aa  367  1e-100  Pseudomonas putida W619  Bacteria  normal  normal  0.814601 
 
 
-
 
NC_002947  PP_4521  aerotaxis receptor, putative  41.9 
 
 
521 aa  365  1e-99  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  43.23 
 
 
532 aa  365  1e-99  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2014  aerotaxis receptor  41.33 
 
 
521 aa  364  2e-99  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_2690  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  38.67 
 
 
524 aa  363  3e-99  Shewanella sediminis HAW-EB3  Bacteria  normal  0.487789  normal 
 
 
-
 
NC_010322  PputGB1_1653  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.53 
 
 
521 aa  363  3e-99  Pseudomonas putida GB-1  Bacteria  normal  0.976535  normal  0.292811 
 
 
-
 
NC_010501  PputW619_3813  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.52 
 
 
521 aa  362  7.0000000000000005e-99  Pseudomonas putida W619  Bacteria  normal  0.629648  normal  0.0156802 
 
 
-
 
NC_009439  Pmen_1902  methyl-accepting chemotaxis sensory transducer  42.48 
 
 
521 aa  362  9e-99  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00326538  normal  0.948878 
 
 
-
 
NC_007492  Pfl01_1833  chemotaxis sensory transducer, Pas/Pac sensor  42.21 
 
 
521 aa  362  1e-98  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.884809  normal 
 
 
-
 
NC_009512  Pput_1390  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
534 aa  362  1e-98  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_4027  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.9 
 
 
521 aa  360  4e-98  Pseudomonas putida GB-1  Bacteria  normal  0.664053  normal  0.0821551 
 
 
-
 
NC_007005  Psyr_3406  PAS  41.14 
 
 
521 aa  360  4e-98  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387271  normal  0.671486 
 
 
-
 
NC_002947  PP_2257  aerotaxis receptor Aer-1  43.1 
 
 
521 aa  357  2.9999999999999997e-97  Pseudomonas putida KT2440  Bacteria  normal  0.215452  normal  0.0215353 
 
 
-
 
NC_009512  Pput_3481  methyl-accepting chemotaxis sensory transducer  41.92 
 
 
521 aa  355  1e-96  Pseudomonas putida F1  Bacteria  normal  normal  0.41765 
 
 
-
 
NC_007005  Psyr_3735  PAS  40.82 
 
 
521 aa  353  5e-96  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.065462 
 
 
-
 
NC_008789  Hhal_1125  methyl-accepting chemotaxis sensory transducer  41.09 
 
 
532 aa  353  5.9999999999999994e-96  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_1800  methyl-accepting chemotaxis sensory transducer  41.68 
 
 
521 aa  351  2e-95  Pseudomonas mendocina ymp  Bacteria  normal  0.258308  normal  0.504821 
 
 
-
 
NC_009092  Shew_2159  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.81 
 
 
523 aa  351  2e-95  Shewanella loihica PV-4  Bacteria  normal  0.416992  normal  0.881373 
 
 
-
 
NC_004578  PSPTO_1648  aerotaxis receptor  40.49 
 
 
521 aa  349  8e-95  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_1888  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.97 
 
 
521 aa  348  1e-94  Pseudomonas putida GB-1  Bacteria  normal  0.378373  normal 
 
 
-
 
NC_008740  Maqu_0262  methyl-accepting chemotaxis sensory transducer  39.92 
 
 
524 aa  348  1e-94  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3908  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
524 aa  346  6e-94  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_0543  methyl-accepting chemotaxis sensory transducer  39.17 
 
 
524 aa  346  6e-94  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3725  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.17 
 
 
524 aa  346  6e-94  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0583  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.19 
 
 
524 aa  346  7e-94  Shewanella sp. MR-4  Bacteria  normal  normal  0.344402 
 
 
-
 
NC_008322  Shewmr7_3447  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  42.19 
 
 
524 aa  345  8e-94  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3782  methyl-accepting chemotaxis sensory transducer  39.55 
 
 
524 aa  345  1e-93  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3294  methyl-accepting chemotaxis sensory transducer  37.73 
 
 
524 aa  344  2e-93  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_0584  methyl-accepting chemotaxis protein  40.16 
 
 
524 aa  343  4e-93  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_0582  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.78 
 
 
524 aa  343  5.999999999999999e-93  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_4186  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40 
 
 
526 aa  341  2e-92  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1282  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
522 aa  337  5e-91  Shewanella baltica OS185  Bacteria  normal  0.13527  n/a   
 
 
-
 
NC_009052  Sbal_1238  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
522 aa  336  5.999999999999999e-91  Shewanella baltica OS155  Bacteria  normal  0.0615962  n/a   
 
 
-
 
NC_011663  Sbal223_3073  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.26 
 
 
522 aa  335  9e-91  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000166485 
 
 
-
 
NC_009997  Sbal195_1317  methyl-accepting chemotaxis sensory transducer  39.26 
 
 
522 aa  335  9e-91  Shewanella baltica OS195  Bacteria  normal  normal  0.0176898 
 
 
-
 
NC_009654  Mmwyl1_3595  methyl-accepting chemotaxis sensory transducer  37.38 
 
 
515 aa  334  2e-90  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_3404  methyl-accepting chemotaxis protein  40.31 
 
 
522 aa  333  5e-90  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_0532  putative methyl-accepting chemotaxis sensory transducer  39.24 
 
 
523 aa  331  2e-89  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.0374128 
 
 
-
 
NC_008740  Maqu_3270  methyl-accepting chemotaxis sensory transducer  40.29 
 
 
532 aa  330  3e-89  Marinobacter aquaeolei VT8  Bacteria  normal  0.415489  n/a   
 
 
-
 
NC_009438  Sputcn32_3109  methyl-accepting chemotaxis sensory transducer  38.17 
 
 
522 aa  327  3e-88  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_2726  methyl-accepting chemotaxis sensory transducer  39.28 
 
 
538 aa  323  5e-87  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_1220  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.15 
 
 
522 aa  322  9.999999999999999e-87  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1150  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.15 
 
 
522 aa  321  1.9999999999999998e-86  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_1149  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.95 
 
 
522 aa  321  1.9999999999999998e-86  Shewanella sp. MR-4  Bacteria  normal  0.737349  normal 
 
 
-
 
NC_013457  VEA_001512  aerotaxis sensor receptor protein  34.42 
 
 
516 aa  317  2e-85  Vibrio sp. Ex25  Bacteria  normal  0.961146  n/a   
 
 
-
 
NC_009831  Ssed_1987  methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor  37.35 
 
 
518 aa  316  8e-85  Shewanella sediminis HAW-EB3  Bacteria  normal  0.185607  normal  0.0170041 
 
 
-
 
NC_008345  Sfri_3219  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  38.67 
 
 
516 aa  314  1.9999999999999998e-84  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.1353  n/a   
 
 
-
 
NC_009901  Spea_3023  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.45 
 
 
514 aa  307  3e-82  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_0389  methyl-accepting chemotaxis sensory transducer  43.03 
 
 
419 aa  304  2.0000000000000002e-81  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  37.55 
 
 
522 aa  304  3.0000000000000004e-81  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  37.01 
 
 
520 aa  302  8.000000000000001e-81  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_3519  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.65 
 
 
514 aa  301  1e-80  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  37.78 
 
 
522 aa  301  1e-80  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03783  Methyl-accepting chemotaxis protein (PAS/PAC and MSP doamins)  36.5 
 
 
527 aa  302  1e-80  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_1214  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.9 
 
 
527 aa  302  1e-80  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.78 
 
 
522 aa  301  2e-80  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  36.25 
 
 
511 aa  300  3e-80  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.35 
 
 
522 aa  300  3e-80  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  36.35 
 
 
522 aa  300  3e-80  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2577  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  37.87 
 
 
524 aa  300  5e-80  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
533 aa  300  6e-80  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.95 
 
 
522 aa  298  1e-79  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  37.17 
 
 
522 aa  297  3e-79  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  39.47 
 
 
517 aa  292  1e-77  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_0337  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.42 
 
 
517 aa  288  2e-76  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1621  methyl-accepting chemotaxis protein  33.81 
 
 
513 aa  285  2.0000000000000002e-75  Colwellia psychrerythraea 34H  Bacteria  normal  0.113175  n/a   
 
 
-
 
NC_009654  Mmwyl1_3460  methyl-accepting chemotaxis sensory transducer  34.42 
 
 
520 aa  285  2.0000000000000002e-75  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5601  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.92 
 
 
551 aa  278  2e-73  Ralstonia eutropha JMP134  Bacteria  normal  0.510218  n/a   
 
 
-
 
NC_007298  Daro_1363  PAS  37.35 
 
 
544 aa  276  6e-73  Dechloromonas aromatica RCB  Bacteria  normal  hitchhiker  0.000284571 
 
 
-
 
NC_007974  Rmet_3682  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.7 
 
 
552 aa  267  4e-70  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0302709 
 
 
-
 
NC_007298  Daro_0674  PAS  34.98 
 
 
544 aa  265  2e-69  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0602  methyl-accepting chemotaxis protein  34.95 
 
 
536 aa  263  8e-69  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.6 
 
 
598 aa  262  1e-68  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.87 
 
 
511 aa  262  1e-68  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3295  methyl-accepting chemotaxis sensory transducer  36.49 
 
 
519 aa  258  2e-67  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2292  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.57 
 
 
517 aa  258  2e-67  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.04 
 
 
561 aa  254  3e-66  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_007651  BTH_I0618  methyl-accepting chemotaxis protein  33.09 
 
 
583 aa  253  7e-66  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2685  methyl-accepting chemotaxis protein  33.77 
 
 
580 aa  253  8.000000000000001e-66  Burkholderia mallei SAVP1  Bacteria  normal  0.394636  n/a   
 
 
-
 
NC_006348  BMA0264  methyl-accepting chemotaxis protein  33.77 
 
 
580 aa  253  8.000000000000001e-66  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_1045  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.15 
 
 
564 aa  253  8.000000000000001e-66  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2473  methyl-accepting chemotaxis protein  33.77 
 
 
580 aa  253  8.000000000000001e-66  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A2390  methyl-accepting chemotaxis protein  33.77 
 
 
580 aa  253  8.000000000000001e-66  Burkholderia mallei NCTC 10229  Bacteria  normal  0.790589  n/a   
 
 
-
 
NC_010623  Bphy_4269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.75 
 
 
556 aa  252  1e-65  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007406  Nwi_0530  methyl-accepting chemotaxis protein  31.95 
 
 
569 aa  250  4e-65  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.667624  normal 
 
 
-
 
NC_009076  BURPS1106A_0760  aerotaxis sensor receptor  33.21 
 
 
583 aa  249  7e-65  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2125  methyl-accepting chemotaxis protein  35.86 
 
 
514 aa  249  8e-65  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0927  methyl-accepting chemotaxis protein  33.21 
 
 
623 aa  249  1e-64  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_0749  aerotaxis sensor receptor  33.21 
 
 
669 aa  248  2e-64  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2113  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  34.91 
 
 
550 aa  248  2e-64  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
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