More than 300 homologs were found in PanDaTox collection
for query gene PA14_38900 on replicon NC_008463
Organism: Pseudomonas aeruginosa UCBPP-PA14



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008463  PA14_38900  putative two-component response regulator  100 
 
 		 225 aa  431  1e-120  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.899747  normal  1 
 
 
-
 
NC_009656  PSPA7_3314  putative two-component response regulator  86.67 
 
 		 225 aa  352  2.9999999999999997e-96  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1951  two component LuxR family transcriptional regulator  68.54 
 
 		 216 aa  287  9e-77  Pseudomonas mendocina ymp  Bacteria  normal  0.142543  normal  0.70584 
 
 
-
 
NC_010322  PputGB1_3131  two component LuxR family transcriptional regulator  64.93 
 
 		 212 aa  278  5e-74  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.33361 
 
 
-
 
NC_009512  Pput_3091  two component LuxR family transcriptional regulator  65.88 
 
 		 212 aa  277  1e-73  Pseudomonas putida F1  Bacteria  normal  0.425372  normal  1 
 
 
-
 
NC_002947  PP_2672  LuxR family DNA-binding response regulator  65.88 
 
 		 212 aa  276  2e-73  Pseudomonas putida KT2440  Bacteria  normal  0.24109  normal  1 
 
 
-
 
NC_002977  MCA0777  LuxR family DNA binding response regulator  47.66 
 
 		 215 aa  182  4.0000000000000006e-45  Methylococcus capsulatus str. Bath  Bacteria  normal  0.891731  n/a   
 
 
-
 
NC_008340  Mlg_2722  two component LuxR family transcriptional regulator  44.98 
 
 		 214 aa  164  8e-40  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  0.378798 
 
 
-
 
NC_010524  Lcho_0242  two component LuxR family transcriptional regulator  43.54 
 
 		 211 aa  161  8.000000000000001e-39  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.000159114 
 
 
-
 
NC_007947  Mfla_0815  two component LuxR family transcriptional regulator  43.27 
 
 		 213 aa  160  2e-38  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.00000180305  normal  1 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  44.12 
 
 		 232 aa  155  5.0000000000000005e-37  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007952  Bxe_B2471  two component LuxR family transcriptional regulator  45.58 
 
 		 220 aa  155  5.0000000000000005e-37  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.55611 
 
 
-
 
NC_007948  Bpro_0709  two component LuxR family transcriptional regulator  45.85 
 
 		 224 aa  154  1e-36  Polaromonas sp. JS666  Bacteria  normal  0.421893  normal  1 
 
 
-
 
NC_008781  Pnap_0790  two component LuxR family transcriptional regulator  39.42 
 
 		 214 aa  154  1e-36  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.870503  normal  0.997505 
 
 
-
 
NC_008825  Mpe_A0357  two-component response regulator  44.23 
 
 		 210 aa  148  9e-35  Methylibium petroleiphilum PM1  Bacteria  hitchhiker  0.00848176  normal  1 
 
 
-
 
NC_013501  Rmar_2227  two component transcriptional regulator, LuxR family  44.66 
 
 		 217 aa  145  4.0000000000000006e-34  Rhodothermus marinus DSM 4252  Bacteria  normal  0.632961  n/a   
 
 
-
 
NC_010682  Rpic_3729  two component transcriptional regulator, LuxR family  42.51 
 
 		 214 aa  144  8.000000000000001e-34  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007947  Mfla_1714  two component LuxR family transcriptional regulator  38.94 
 
 		 213 aa  144  9e-34  Methylobacillus flagellatus KT  Bacteria  normal  0.975164  hitchhiker  0.000785935 
 
 
-
 
NC_012856  Rpic12D_3406  two component transcriptional regulator, LuxR family  42.51 
 
 		 214 aa  144  1e-33  Ralstonia pickettii 12D  Bacteria  normal  0.588591  normal  1 
 
 
-
 
NC_007947  Mfla_0816  two component LuxR family transcriptional regulator  42.23 
 
 		 212 aa  144  1e-33  Methylobacillus flagellatus KT  Bacteria  hitchhiker  0.0000419268  normal  1 
 
 
-
 
NC_012917  PC1_2202  two component transcriptional regulator, LuxR family  35.58 
 
 		 213 aa  142  5e-33  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_2450  two component LuxR family transcriptional regulator  38.42 
 
 		 214 aa  142  6e-33  Pseudoalteromonas atlantica T6c  Bacteria  hitchhiker  0.00539256  n/a   
 
 
-
 
NC_010725  Mpop_3828  two component transcriptional regulator, LuxR family  38.76 
 
 		 220 aa  141  7e-33  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_2271  two component transcriptional regulator, LuxR family  43.69 
 
 		 223 aa  140  9.999999999999999e-33  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010505  Mrad2831_0320  two component LuxR family transcriptional regulator  40.19 
 
 		 221 aa  141  9.999999999999999e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.15389  normal  1 
 
 
-
 
NC_008825  Mpe_A3043  LuxR family DNA binding response regulator  40 
 
 		 209 aa  139  3e-32  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007974  Rmet_4516  two component LuxR family transcriptional regulator  41.46 
 
 		 214 aa  139  3e-32  Cupriavidus metallidurans CH34  Bacteria  normal  0.0463384  normal  0.0270495 
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  40.58 
 
 		 206 aa  139  3e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal  1 
 
 
-
 
NC_010524  Lcho_0901  two component LuxR family transcriptional regulator  38.65 
 
 		 235 aa  139  3.9999999999999997e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  38.57 
 
 		 210 aa  138  8.999999999999999e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.612124 
 
 
-
 
NC_011094  SeSA_A4000  DNA-binding transcriptional activator UhpA  40.98 
 
 		 196 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.348805  normal  1 
 
 
-
 
NC_012912  Dd1591_1895  two component transcriptional regulator, LuxR family  37.25 
 
 		 213 aa  137  1e-31  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_011080  SNSL254_A4071  DNA-binding transcriptional activator UhpA  40.98 
 
 		 196 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011205  SeD_A4179  DNA-binding transcriptional activator UhpA  40.98 
 
 		 196 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B4016  DNA-binding transcriptional activator UhpA  40.98 
 
 		 196 aa  137  1e-31  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_2499  two component LuxR family transcriptional regulator  39.23 
 
 		 209 aa  137  2e-31  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.449467  n/a   
 
 
-
 
NC_010159  YpAngola_A1688  LuxR family DNA-binding response regulator  39.23 
 
 		 209 aa  137  2e-31  Yersinia pestis Angola  Bacteria  hitchhiker  0.000000202542  normal  0.0533619 
 
 
-
 
NC_011083  SeHA_C4121  DNA-binding transcriptional activator UhpA  40.98 
 
 		 196 aa  137  2e-31  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.97066  normal  1 
 
 
-
 
NC_009708  YpsIP31758_2402  LuxR family DNA-binding response regulator  39.23 
 
 		 209 aa  137  2e-31  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.0000000000000137953  n/a   
 
 
-
 
NC_007347  Reut_A3419  LuxR response regulator receiver  42.79 
 
 		 231 aa  136  3.0000000000000003e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.393456  n/a   
 
 
-
 
NC_007347  Reut_A1785  two component LuxR family transcriptional regulator  38.83 
 
 		 206 aa  135  4e-31  Ralstonia eutropha JMP134  Bacteria  normal  0.762084  n/a   
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  38.76 
 
 		 213 aa  135  4e-31  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I2141  response regulator  34.13 
 
 		 214 aa  135  5e-31  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.126922  n/a   
 
 
-
 
NC_009436  Ent638_0027  DNA-binding transcriptional activator UhpA  41.87 
 
 		 197 aa  135  6.0000000000000005e-31  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_3271  response regulator  32.54 
 
 		 214 aa  135  6.0000000000000005e-31  Colwellia psychrerythraea 34H  Bacteria  normal  0.0222898  n/a   
 
 
-
 
NC_009485  BBta_6075  two-component response regulator  41.26 
 
 		 216 aa  135  6.0000000000000005e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_5126  two component LuxR family transcriptional regulator  37.62 
 
 		 209 aa  135  7.000000000000001e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.135043  normal  0.384971 
 
 
-
 
NC_009675  Anae109_1810  two component LuxR family transcriptional regulator  40.47 
 
 		 218 aa  135  7.000000000000001e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012917  PC1_1369  two component transcriptional regulator, LuxR family  39.71 
 
 		 218 aa  135  7.000000000000001e-31  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.380225  n/a   
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  35.11 
 
 		 226 aa  134  8e-31  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009832  Spro_1848  response regulator  34.93 
 
 		 218 aa  134  8e-31  Serratia proteamaculans 568  Bacteria  normal  0.0524957  normal  1 
 
 
-
 
CP001509  ECD_03553  DNA-binding response regulator in two-component regulatory system wtih UhpB  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
CP001637  EcDH1_0034  two component transcriptional regulator, LuxR family  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009078  BURPS1106A_A3133  LuxR family DNA-binding response regulator  39.41 
 
 		 215 aa  134  9.999999999999999e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_5099  DNA-binding transcriptional activator UhpA  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.0828785 
 
 
-
 
NC_013421  Pecwa_1775  two component transcriptional regulator, LuxR family  39.71 
 
 		 209 aa  134  9.999999999999999e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  0.814588  n/a   
 
 
-
 
NC_010658  SbBS512_E4250  DNA-binding transcriptional activator UhpA  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  34.6 
 
 		 213 aa  134  9.999999999999999e-31  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_009801  EcE24377A_4178  DNA-binding transcriptional activator UhpA  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Escherichia coli E24377A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_0030  DNA-binding transcriptional activator UhpA  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012892  B21_03495  hypothetical protein  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_4034  DNA-binding transcriptional activator UhpA  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  0.383338 
 
 
-
 
NC_009800  EcHS_A3882  DNA-binding transcriptional activator UhpA  40.49 
 
 		 196 aa  134  9.999999999999999e-31  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_2669  response regulator  34.43 
 
 		 218 aa  133  1.9999999999999998e-30  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  decreased coverage  0.000700042  n/a   
 
 
-
 
NC_013421  Pecwa_1594  response regulator  34.43 
 
 		 218 aa  133  1.9999999999999998e-30  Pectobacterium wasabiae WPP163  Bacteria  normal  0.518893  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  34.29 
 
 		 215 aa  133  1.9999999999999998e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A1216  two component LuxR family transcriptional regulator  41.38 
 
 		 215 aa  133  1.9999999999999998e-30  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_1588  two component LuxR family transcriptional regulator  38.46 
 
 		 215 aa  133  1.9999999999999998e-30  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.731747  normal  0.987016 
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  37.5 
 
 		 214 aa  133  1.9999999999999998e-30  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal  1 
 
 
-
 
NC_008825  Mpe_A1026  response regulator protein  40.29 
 
 		 217 aa  133  1.9999999999999998e-30  Methylibium petroleiphilum PM1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006349  BMAA2071  LuxR family DNA-binding response regulator  38.92 
 
 		 215 aa  132  3e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1379  LuxR family DNA-binding response regulator  38.92 
 
 		 215 aa  132  3e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A3248  LuxR family DNA-binding response regulator  38.92 
 
 		 215 aa  133  3e-30  Burkholderia pseudomallei 668  Bacteria  normal  0.780539  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1463  LuxR family DNA-binding response regulator  38.92 
 
 		 215 aa  132  3e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_012791  Vapar_3060  two component transcriptional regulator, LuxR family  38.5 
 
 		 215 aa  132  3e-30  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  40.55 
 
 		 218 aa  133  3e-30  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A2364  LuxR family DNA-binding response regulator  38.92 
 
 		 215 aa  132  3e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008784  BMASAVP1_1100  LuxR family DNA-binding response regulator  38.92 
 
 		 215 aa  132  3e-30  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  38.53 
 
 		 224 aa  132  6e-30  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_0560  DNA-binding response regulator, LuxR family  35.89 
 
 		 209 aa  132  6e-30  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_010678  Rpic_4426  two component transcriptional regulator, LuxR family  41.67 
 
 		 215 aa  131  6e-30  Ralstonia pickettii 12J  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5451  two component LuxR family transcriptional regulator  40.98 
 
 		 223 aa  132  6e-30  Ralstonia eutropha JMP134  Bacteria  normal  0.761649  n/a   
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  40.98 
 
 		 220 aa  132  6e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  34.21 
 
 		 236 aa  132  6e-30  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_012857  Rpic12D_4559  two component transcriptional regulator, LuxR family  41.67 
 
 		 215 aa  131  6e-30  Ralstonia pickettii 12D  Bacteria  normal  0.0669727  normal  0.0839611 
 
 
-
 
NC_008781  Pnap_2640  two component LuxR family transcriptional regulator  42.51 
 
 		 205 aa  132  6e-30  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.437778  normal  1 
 
 
-
 
NC_009675  Anae109_1385  two component LuxR family transcriptional regulator  38.57 
 
 		 212 aa  132  6e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2855  two component transcriptional regulator, LuxR family  41.43 
 
 		 217 aa  132  6e-30  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  36.45 
 
 		 217 aa  131  6.999999999999999e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  36.67 
 
 		 210 aa  131  9e-30  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal  1 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  35.81 
 
 		 210 aa  130  1.0000000000000001e-29  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.458284 
 
 
-
 
NC_010501  PputW619_4792  two component LuxR family transcriptional regulator  39.02 
 
 		 209 aa  130  1.0000000000000001e-29  Pseudomonas putida W619  Bacteria  normal  1  normal  0.951072 
 
 
-
 
NC_002947  PP_0410  LuxR family two component transcriptional regulator  38.54 
 
 		 209 aa  130  1.0000000000000001e-29  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  36.62 
 
 		 222 aa  131  1.0000000000000001e-29  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.280021 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  36.54 
 
 		 213 aa  130  1.0000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_3504  DNA-binding transcriptional activator UhpA  40 
 
 		 196 aa  131  1.0000000000000001e-29  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_009436  Ent638_2501  response regulator  34.29 
 
 		 218 aa  131  1.0000000000000001e-29  Enterobacter sp. 638  Bacteria  hitchhiker  0.000242353  normal  0.495647 
 
 
-
 
NC_010322  PputGB1_0441  two component LuxR family transcriptional regulator  38.54 
 
 		 209 aa  130  1.0000000000000001e-29  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  40.28 
 
 		 215 aa  130  1.0000000000000001e-29  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009512  Pput_0444  two component LuxR family transcriptional regulator  38.54 
 
 		 209 aa  130  1.0000000000000001e-29  Pseudomonas putida F1  Bacteria  normal  1  normal  0.577588 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>