| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_0444 |
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| Symbol | |
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| ID | 5193727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 513543 |
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| End bp | 514172 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640584888 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001265798 |
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| Protein GI | 148545696 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.577588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCGAG TACTGGTGGC CGAAGACCAC ACCATTGTCC GTGAAGGCAT CAAGCAGTTG
ATTGGCCTGG CCAAGGACAT GCAAGTGGCG GGGGAGGCCG GTAATGGCGA GCAGTTGCTC
GAAACCCTGC GCCACACACC GTGCGAGGTG GTACTGCTGG ATATCTCGAT GCCGGGTGTG
AACGGCCTGG AGGCGATCCC GCGTATCCGT GCGCTGCACG ATGCTCCAGC GATCCTGATG
TTGTCGATGC ACGATGAGGC ACAGATGGCG GCGCGGGCGC TGAAGGCCGG TGCGGCGGGC
TATGCCACCA AAGACAGTGA TCCGGCGTTG TTGTTGACAG CGATTCGTCG GGTGGCCGGT
GGCGGGCGTT ATATCGACCC GTCGCTGGCC GACCGCATGG TGTTCGAAGT AGGCCTCACC
GAATCCCGGC CGTTGCACAC ACTGCTCTCG GAGCGCGAGT TTTCAGTGTT CGAGCGCCTG
GCCCAAGGCG CCAACGTCAA CGACATCGCC CAGCAGTTGG CGCTGTCGAG CAAGACCATC
AGCACCCACA AGGCACGCCT GATGCAGAAG TTGAAAGTGA ACTCGCTGGC GGAGCTGGTG
AAGTACGCCA TGGAGCACAA GCTGGTCTGA
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| Protein sequence | MIRVLVAEDH TIVREGIKQL IGLAKDMQVA GEAGNGEQLL ETLRHTPCEV VLLDISMPGV
NGLEAIPRIR ALHDAPAILM LSMHDEAQMA ARALKAGAAG YATKDSDPAL LLTAIRRVAG
GGRYIDPSLA DRMVFEVGLT ESRPLHTLLS EREFSVFERL AQGANVNDIA QQLALSSKTI
STHKARLMQK LKVNSLAELV KYAMEHKLV
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