| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4034 |
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| Symbol | uhpA |
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| ID | 6143884 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4123575 |
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| End bp | 4124165 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641618859 |
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| Product | DNA-binding transcriptional activator UhpA |
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| Protein accession | YP_001745997 |
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| Protein GI | 170684214 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.383338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCACCG TTGCACTTAT AGACGATCAC CTCATCGTCC GCTCCGGCTT TGCGCAGCTG
CTGGGGCTGG AACCTGATTT GCAGGTAGTT GCCGAGTTTG GTTCGGGGCG CGAGGCGTTG
GCGGGGCTGC CGGGGCGCGG TGTGCAGGTG TGTATTTGCG ATATCTCCAT GCCCGATATC
TCCGGTCTGG AGCTGCTAAG CCAGCTGCCG AAAGGTATGG CGACGATTAT GCTCTCTGTT
CATGACAGTC CGGCGCTGGT TGAGCAGGCG CTTAACGCGG GGGCGCGCGG CTTTCTCTCC
AAGCGTTGTA GCCCTGACGA ACTGATTGCT GCGGTGCATA CGGTTGCCAC GGGCGGCTGT
TATCTGACGC CGGATATTGC TATTAAACTG GCATCTGGTC GCCAGGACCC GCTGACCAAA
CGTGAACGGC AGGTGGCAGA AAAACTGGCG CAAGGAATGG CGGTGAAAGA GATTGCTGCC
GAACTGGGCT TGTCACCGAA AACGGTACAC GTCCATCGCG CTAACCTGAT GGAAAAACTG
GGCGTCAGTA ACGACGTTGA ACTGGCGCGC CGCATGTTTG ATGGCTGGTG A
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| Protein sequence | MITVALIDDH LIVRSGFAQL LGLEPDLQVV AEFGSGREAL AGLPGRGVQV CICDISMPDI
SGLELLSQLP KGMATIMLSV HDSPALVEQA LNAGARGFLS KRCSPDELIA AVHTVATGGC
YLTPDIAIKL ASGRQDPLTK RERQVAEKLA QGMAVKEIAA ELGLSPKTVH VHRANLMEKL
GVSNDVELAR RMFDGW
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