Gene EcDH1_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_0034 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp33036 
End bp33626 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content59% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionACX37732 
Protein GI260447310 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones98 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACCG TTGCCCTTAT AGACGATCAC CTCATCGTCC GCTCCGGCTT TGCGCAGCTG 
CTGGGGCTGG AACCTGATTT GCAGGTAGTT GCCGAGTTTG GTTCGGGGCG CGAGGCGCTG
GCGGGGCTGC CGGGGCGCGG TGTGCAGGTG TGTATTTGCG ATATCTCCAT GCCCGATATC
TCCGGTCTGG AGCTGCTAAG CCAGCTGCCG AAAGGTATGG CGACGATTAT GCTCTCCGTT
CACGACAGTC CTGCGCTGGT TGAGCAGGCG CTTAACGCGG GGGCACGCGG CTTTCTTTCC
AAACGCTGTA GCCCGGATGA ACTCATTGCT GCGGTGCATA CGGTTGCCAC GGGCGGCTGT
TATCTGACGC CGGATATTGC CATTAAACTG GCATCCGGTC GTCAGGACCC GCTAACCAAA
CGTGAACGCC AGGTGGCGGA AAAACTGGCG CAAGGAATGG CGGTGAAAGA GATTGCCGCC
GAACTGGGCT TGTCACCGAA AACGGTACAC GTCCATCGCG CCAATCTGAT GGAAAAACTG
GGCGTCAGTA ACGACGTAGA GCTGGCGCGC CGCATGTTTG ATGGCTGGTG A
 
Protein sequence
MITVALIDDH LIVRSGFAQL LGLEPDLQVV AEFGSGREAL AGLPGRGVQV CICDISMPDI 
SGLELLSQLP KGMATIMLSV HDSPALVEQA LNAGARGFLS KRCSPDELIA AVHTVATGGC
YLTPDIAIKL ASGRQDPLTK RERQVAEKLA QGMAVKEIAA ELGLSPKTVH VHRANLMEKL
GVSNDVELAR RMFDGW