| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2669 |
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| Symbol | |
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| ID | 8133620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 3025559 |
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| End bp | 3026215 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644865955 |
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| Product | response regulator |
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| Protein accession | YP_003018235 |
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| Protein GI | 253689045 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000700042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGATTAGCG TTTTTCTTGT TGATGACCAT GAACTGGTGC GGGCAGGGAT ACGACGCATT
CTTGACGATA TCAAAGGTCT GAAAGTGGTT GGTGAGGCAT GCTGTGGTGA AGATGCCGTG
AAATGGTGCC GAAGCAATGA TGTGGATGTT GTCCTGATGG ACATGAGCAT GCCGGGCATC
GGCGGGCTTG AAGCAACGCG TAAGATTCTG CGTTTTACTC CAGATATAAA AGTCATCATG
CTCACTATTT ATACGGAGAA TCCTCTGCCC GCAAAAGTGA TGCAAGCCGG AGCTGCGGGA
TATGTGAGTA AAGCGGCTGC CCCTCAGGAA GTGATCTCAG CCATTCGAGC AGTGCATGCC
GGTAAGCGGT ATATTGCTTC TGATATCGCC CAACAGATGG CATTAAGCCA GTTGGAGCCG
CAGACGGACG CGCCGCTGGA GTGTTTGTCT GAACGCGAAT TACAGATTAT GCTAATGATA
ACGAAAGGGC AGAAAGTGAC TGAAATCTCA GATCAGCTTA ATCTCAGCCC TAAAACAGTG
AACAGCTATC GTTACCGTAT GTTTAGCAAG TTGAATATCA ACGGCGACGT AGAGTTGACT
CATCTGGCTA TCAAGCATGG GCTTTTTACC GCGGAGACAT TGTTAAGTAG TGAGTGA
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| Protein sequence | MISVFLVDDH ELVRAGIRRI LDDIKGLKVV GEACCGEDAV KWCRSNDVDV VLMDMSMPGI
GGLEATRKIL RFTPDIKVIM LTIYTENPLP AKVMQAGAAG YVSKAAAPQE VISAIRAVHA
GKRYIASDIA QQMALSQLEP QTDAPLECLS ERELQIMLMI TKGQKVTEIS DQLNLSPKTV
NSYRYRMFSK LNINGDVELT HLAIKHGLFT AETLLSSE
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