Gene SbBS512_E4250 details

Gene Information

• Locus tag: SbBS512_E4250
• Symbol: uhpA
• ID: 6273218
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3971687
• End bp: 3972277
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641728065
• Product: DNA-binding transcriptional activator UhpA
• Protein accession: YP_001882486
• Protein GI: 187730907
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACCG TTGCCCTTAT AGACGATCAC CTCATCGTCC GCTCCGGCTT TGCGCAGCTG 
CTGGGGCTGG AACCTGATTT GCAGGTAGTT GCCGAGTTTG GTTCGGGGCG CGAGGCGCTG 
GCGGGGCTGC CGGGGCGCGG TGTGCAGGTG TGTATTTGCG ATATCTCCAT GCCCGATATC 
TCCGGTCTGG AGCTGCTAAG CCAGCTGCCG AAAGGTATGG CGACGATTAT GCTCTCCGTT 
CACGACAGTC CTGCGCTGGT TGAGCAGGCG CTTAACGCGG GGGCACGCGG CTTTCTTTCC 
AAACGCTGTA GCCCGGATGA ACTCATTGCT GCGGTGCATA CGGTTGCCAC GGGCGGCTGT 
TATCTGACGC CGGATATTGC CATTAAACTG GCATCCGGTC GTCAGGACCC GCTAACCAAA 
CGTGAACGCC AGGTGGCGGA AAAACTGGCG CAAGGAATGG CGGTGAAAGA GATTGCCGCC 
GAACTGGGCT TGTCACCGAA AACGGTACAC GTCCATCGCG CCAATCTGAT GGAAAAACTG 
GGCGTCAGTA ACGACGTAGA GCTGGCGCGC CGCATGTTTG ATGGCTGGTG A 

 

Protein sequence

MITVALIDDH LIVRSGFAQL LGLEPDLQVV AEFGSGREAL AGLPGRGVQV CICDISMPDI 
SGLELLSQLP KGMATIMLSV HDSPALVEQA LNAGARGFLS KRCSPDELIA AVHTVATGGC 
YLTPDIAIKL ASGRQDPLTK RERQVAEKLA QGMAVKEIAA ELGLSPKTVH VHRANLMEKL 
GVSNDVELAR RMFDGW