| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_4792 |
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| Symbol | |
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| ID | 6113781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5281370 |
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| End bp | 5281999 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624603 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001751637 |
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| Protein GI | 170723949 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.951072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTCGAG TGCTGGTGGC CGAAGACCAC ACCATTGTCC GCGAAGGCAT CAAGCAGTTG
ATCGGCCTGG CCAAGGATAT GCAGGTGGTG GGGGAGGCTG GTAATGGTGA ACAGTTGCTG
GAAACCCTGC GCCACACCCC CTGCGAAGTG GTGTTGCTGG ATATCTCGAT GCCCGGTGTC
AGTGGGTTGG AGGCAATTGC TCGGATCCGC GCGCTGCACA ACCCGCCGGC GATCCTGATG
CTGTCGATGC ACGACGAAGC GCAGATGGCC GCGCGCGCGC TCAAGGCCGG CGCTGCCGGC
TATGCCACCA AGGACAGTGA CCCTGCCTTG CTGCTGACCG CAATCCGGCG GGTGGCCGGC
GGTGGGCGCT ACATCGATCC GGCGTTGGCC GACCGCATGG TCTTCGAGGT TGGCCTGACC
GAAACTCGGC CGCTGCATAC TCTGCTGTCG GAGCGCGAGT TCTCGGTGTT CGAACGTTTG
GCTCAAGGTG CCAACGTCAA CGATATAGCT CAGCAGCTGG CGCTCTCCAG CAAGACCATC
AGCACCCACA AGGCGAGGCT GATGCAGAAG CTCAAGGTCA ACTCGCTGGC TGAACTGGTG
AAGTACGCCA TGGAGCACAA GCTGGTATGA
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| Protein sequence | MIRVLVAEDH TIVREGIKQL IGLAKDMQVV GEAGNGEQLL ETLRHTPCEV VLLDISMPGV
SGLEAIARIR ALHNPPAILM LSMHDEAQMA ARALKAGAAG YATKDSDPAL LLTAIRRVAG
GGRYIDPALA DRMVFEVGLT ETRPLHTLLS EREFSVFERL AQGANVNDIA QQLALSSKTI
STHKARLMQK LKVNSLAELV KYAMEHKLV
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