| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A4179 |
|---|
| Symbol | uhpA |
|---|
| ID | 6873984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | - |
|---|
| Start bp | 4023581 |
|---|
| End bp | 4024171 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642787112 |
|---|
| Product | DNA-binding transcriptional activator UhpA |
|---|
| Protein accession | YP_002217738 |
|---|
| Protein GI | 198243718 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACCG TTGCCCTTAT CGACGACCAC CTTATCGTCC GCTCCGGCTT TGCACAGCTA
CTGGGGCTGG AACCTGATTT GCAGGTGGTC GCTGAGTTTG GTTCCGGGCG CGAAGCGTTG
GCAGGTTTAC CGGGGCGCGG CGTACAGGTG TGTATCTGCG ATATTTCGAT GCCGGATATT
TCCGGACTGG AGCTGCTAAG CCAACTGCCA AAAGGGATGG CGACGATCAT GCTCTCGGTT
CACGATAGCC CGGCGCTGGT GGAACAGGCG TTGAACGCCG GCGCGCGCGG TTTTCTCTCT
AAACGCTGTA GTCCGGATGA ACTGATCGCC GCGGTGCATA CGGTGGCGAC GGGCGGCTGC
TATTTGACCC CCGATATTGC CGTGAAACTG GCGGCGGGTC GGCAAGATCC GCTGACCAAA
CGCGAGCGTC AAGTGGCGGA AAAACTCGCC CAGGGTATGG CGGTAAAAGA GATTGCCGCC
GAACTGGGGC TGTCGCCAAA AACGGTGCAT GTCCATCGCG CGAATCTACT GGAAAAATTA
GGCGTCAGCA ATGACGTTGA ACTGGCGCAT CGCATGTTTG ACGGTTGGTA A
|
|---|
| Protein sequence | MITVALIDDH LIVRSGFAQL LGLEPDLQVV AEFGSGREAL AGLPGRGVQV CICDISMPDI
SGLELLSQLP KGMATIMLSV HDSPALVEQA LNAGARGFLS KRCSPDELIA AVHTVATGGC
YLTPDIAVKL AAGRQDPLTK RERQVAEKLA QGMAVKEIAA ELGLSPKTVH VHRANLLEKL
GVSNDVELAH RMFDGW
|
|---|
| |