More than 300 homologs were found in PanDaTox collection
for query gene Maqu_1999 on replicon NC_008740
Organism: Marinobacter aquaeolei VT8



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008740  Maqu_1999  two component, sigma54 specific, Fis family transcriptional regulator  100 
 
 
481 aa  971    Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2827  two component, sigma54 specific, Fis family transcriptional regulator  62.42 
 
 
470 aa  573  1.0000000000000001e-162  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0126149 
 
 
-
 
NC_008463  PA14_50180  two-component response regulator  61.75 
 
 
473 aa  572  1.0000000000000001e-162  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.966541  hitchhiker  0.00555849 
 
 
-
 
NC_010501  PputW619_3696  two component, sigma54 specific, Fis family transcriptional regulator  61.26 
 
 
458 aa  567  1e-160  Pseudomonas putida W619  Bacteria  normal  0.12736  normal 
 
 
-
 
NC_009656  PSPA7_4272  two-component response regulator  61.62 
 
 
470 aa  563  1.0000000000000001e-159  Pseudomonas aeruginosa PA7  Bacteria  normal  0.299925  n/a   
 
 
-
 
NC_010322  PputGB1_3932  two component, sigma54 specific, Fis family transcriptional regulator  61.6 
 
 
451 aa  559  1e-158  Pseudomonas putida GB-1  Bacteria  normal  0.215439  normal 
 
 
-
 
NC_002947  PP_4371  two component, sigma54 specific, transcriptional regulator, Fis family  61.39 
 
 
451 aa  559  1e-158  Pseudomonas putida KT2440  Bacteria  normal  0.109269  normal  0.91149 
 
 
-
 
NC_009512  Pput_1496  two component, sigma54 specific, Fis family transcriptional regulator  61.18 
 
 
451 aa  561  1e-158  Pseudomonas putida F1  Bacteria  normal  0.190196  normal  0.699272 
 
 
-
 
NC_007912  Sde_2191  diguanylate cyclase/phosphodiesterase  57.35 
 
 
497 aa  559  1e-158  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_3459  helix-turn-helix, Fis-type  59.79 
 
 
471 aa  548  1e-155  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1534  two component, sigma-54 specific, Fis family transcriptional regulator  60.42 
 
 
463 aa  550  1e-155  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_1956  sigma-54 dependent transcriptional regulator/response regulator FleR  59.5 
 
 
471 aa  548  1e-154  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.75595  n/a   
 
 
-
 
NC_009654  Mmwyl1_3450  two component, sigma54 specific, Fis family transcriptional regulator  56.42 
 
 
448 aa  529  1e-149  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011312  VSAL_I2310  sigma-54 dependent response regulator  56.37 
 
 
478 aa  523  1e-147  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_002813  flagellar regulatory protein FleQ  56.69 
 
 
469 aa  503  1e-141  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1616  two component, sigma54 specific, Fis family transcriptional regulator  54.51 
 
 
452 aa  498  1e-140  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_1322  sigma-54 factor, interaction region  54.62 
 
 
446 aa  499  1e-140  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_03164  hypothetical protein  57.29 
 
 
469 aa  499  1e-140  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2578  two component, sigma54 specific, Fis family transcriptional regulator  55.67 
 
 
446 aa  496  1e-139  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1719  flagellar regulatory protein C  55.3 
 
 
479 aa  496  1e-139  Vibrio cholerae O395  Bacteria  normal  0.0473988  n/a   
 
 
-
 
NC_008228  Patl_3049  two component, sigma54 specific, Fis family transcriptional regulator  54.83 
 
 
447 aa  496  1e-139  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02891  flagellar regulatory protein C  54.2 
 
 
445 aa  495  1e-139  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3230  flagellar regulatory protein C  54.39 
 
 
446 aa  492  9.999999999999999e-139  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2928  two component, sigma54 specific, Fis family transcriptional regulator  55.79 
 
 
447 aa  494  9.999999999999999e-139  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2938  two component, sigma54 specific, Fis family transcriptional regulator  55.58 
 
 
447 aa  493  9.999999999999999e-139  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1435  two component, sigma54 specific, transcriptional regulator, Fis family  55.58 
 
 
447 aa  493  9.999999999999999e-139  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3070  two component, sigma54 specific, Fis family transcriptional regulator  55.79 
 
 
447 aa  494  9.999999999999999e-139  Shewanella baltica OS195  Bacteria  normal  normal  0.6792 
 
 
-
 
NC_008577  Shewana3_1340  two component, sigma54 specific, Fis family transcriptional regulator  55.35 
 
 
446 aa  493  9.999999999999999e-139  Shewanella sp. ANA-3  Bacteria  normal  normal  0.598769 
 
 
-
 
NC_008321  Shewmr4_1280  two component, sigma54 specific, Fis family transcriptional regulator  54.93 
 
 
446 aa  489  1e-137  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1347  two component, sigma54 specific, Fis family transcriptional regulator  54.93 
 
 
446 aa  489  1e-137  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1180  two component, sigma54 specific, transcriptional regulator, Fis family protein  55.35 
 
 
449 aa  484  1e-135  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1364  two component, sigma54 specific, Fis family transcriptional regulator  54.6 
 
 
447 aa  482  1e-135  Shewanella loihica PV-4  Bacteria  normal  0.885668  normal 
 
 
-
 
NC_003910  CPS_1500  flagellar regulatory protein C  52.94 
 
 
446 aa  479  1e-134  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3068  two component, sigma54 specific, Fis family transcriptional regulator  53.67 
 
 
452 aa  479  1e-134  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2299  response regulator receiver protein  54.2 
 
 
446 aa  475  1e-133  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1359  two component, sigma54 specific, Fis family transcriptional regulator  52.78 
 
 
450 aa  474  1e-132  Shewanella pealeana ATCC 700345  Bacteria  normal  0.594792  n/a   
 
 
-
 
NC_006368  lpp1726  hypothetical protein  48.08 
 
 
437 aa  452  1.0000000000000001e-126  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl1726  hypothetical protein  48.08 
 
 
437 aa  453  1.0000000000000001e-126  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007520  Tcr_1444  two component, sigma54 specific, Fis family transcriptional regulator  48.45 
 
 
459 aa  440  9.999999999999999e-123  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_2897  two component, sigma54 specific, transcriptional regulator, Fis family  51.27 
 
 
473 aa  430  1e-119  Thauera sp. MZ1T  Bacteria  normal  0.189439  n/a   
 
 
-
 
NC_007298  Daro_0775  helix-turn-helix, Fis-type  49.36 
 
 
457 aa  416  9.999999999999999e-116  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.118214 
 
 
-
 
NC_011901  Tgr7_1972  response regulator receiver protein  51.28 
 
 
455 aa  412  1e-113  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2361  two component sigma-54 specific, transcriptional regulator, Fis famliy  48.63 
 
 
449 aa  404  1e-111  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_04971  acetoacetate metabolism regulatory protein AtoC  45.74 
 
 
444 aa  383  1e-105  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_001184  putative two-component response regulator  44.7 
 
 
443 aa  380  1e-104  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0707  two component, sigma54 specific, Fis family transcriptional regulator  45.3 
 
 
469 aa  370  1e-101  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.112148  normal  0.322603 
 
 
-
 
NC_008789  Hhal_0500  two component, sigma54 specific, Fis family transcriptional regulator  51.38 
 
 
476 aa  367  1e-100  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3661  sigma-54 factor, interaction region  48.98 
 
 
434 aa  359  7e-98  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0079  sigma-54 dependent trancsriptional regulator  42.58 
 
 
433 aa  355  6.999999999999999e-97  Shewanella sediminis HAW-EB3  Bacteria  normal  0.819278  normal 
 
 
-
 
NC_009483  Gura_2678  two component, sigma-54 specific, Fis family transcriptional regulator  42.65 
 
 
457 aa  348  1e-94  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0085  sigma-54 dependent trancsriptional regulator  47.93 
 
 
435 aa  348  2e-94  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  42.13 
 
 
478 aa  345  8e-94  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_1657  two component, sigma54 specific, transcriptional regulator, Fis family  43.35 
 
 
456 aa  345  1e-93  Geobacter lovleyi SZ  Bacteria  normal  0.0365007  n/a   
 
 
-
 
NC_009438  Sputcn32_3478  sigma-54 dependent trancsriptional regulator  45.85 
 
 
436 aa  343  4e-93  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_0437  two component, sigma54 specific, Fis family transcriptional regulator  42.2 
 
 
490 aa  343  5.999999999999999e-93  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0797  two component, sigma54 specific, transcriptional regulator, Fis family  40.9 
 
 
472 aa  341  1e-92  Rhodothermus marinus DSM 4252  Bacteria  normal  0.241811  n/a   
 
 
-
 
NC_002939  GSU0372  sigma-54 dependent DNA-binding response regulator  40.62 
 
 
461 aa  339  5e-92  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_3222  two component, sigma54 specific, transcriptional regulator, Fis family  44.19 
 
 
447 aa  338  9e-92  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0905113 
 
 
-
 
NC_009439  Pmen_4419  two component, sigma54 specific, Fis family transcriptional regulator  42.29 
 
 
469 aa  338  9.999999999999999e-92  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.475055 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  40.33 
 
 
473 aa  338  9.999999999999999e-92  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  40.33 
 
 
473 aa  338  9.999999999999999e-92  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  40.33 
 
 
473 aa  338  1.9999999999999998e-91  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_3981  sigma-54 dependent trancsriptional regulator  45.61 
 
 
433 aa  337  3.9999999999999995e-91  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2018  two component, sigma-54 specific, Fis family transcriptional regulator  43.87 
 
 
447 aa  336  5e-91  Geobacter uraniireducens Rf4  Bacteria  normal  0.110893  n/a   
 
 
-
 
NC_009675  Anae109_1951  two component, sigma54 specific, Fis family transcriptional regulator  39.58 
 
 
470 aa  334  2e-90  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.516267  normal 
 
 
-
 
NC_008009  Acid345_1588  two component, sigma54 specific, Fis family transcriptional regulator  42.53 
 
 
458 aa  334  3e-90  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.13799 
 
 
-
 
NC_013889  TK90_1156  sigma54 specific transcriptional regulator, Fis family  42.38 
 
 
457 aa  333  3e-90  Thioalkalivibrio sp. K90mix  Bacteria  normal  hitchhiker  0.00283001 
 
 
-
 
NC_012918  GM21_1698  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
457 aa  332  1e-89  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000740904 
 
 
-
 
NC_012918  GM21_1635  two component, sigma54 specific, transcriptional regulator, Fis family  43.01 
 
 
457 aa  331  1e-89  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_0300  two component, sigma54 specific, Fis family transcriptional regulator  46.31 
 
 
457 aa  332  1e-89  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  43.6 
 
 
453 aa  330  3e-89  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  40.53 
 
 
461 aa  330  4e-89  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  40.37 
 
 
480 aa  330  4e-89  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_011901  Tgr7_2618  two component, sigma54 specific, transcriptional regulator, Fis family  41.3 
 
 
453 aa  330  4e-89  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.153552  n/a   
 
 
-
 
NC_009675  Anae109_4389  two component, sigma54 specific, Fis family transcriptional regulator  40.5 
 
 
495 aa  329  6e-89  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.205713  normal  0.107293 
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  41.19 
 
 
461 aa  329  7e-89  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  40.62 
 
 
480 aa  329  7e-89  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_011146  Gbem_2521  two component, sigma54 specific, transcriptional regulator, Fis family  40.29 
 
 
457 aa  329  8e-89  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  40.53 
 
 
461 aa  328  1.0000000000000001e-88  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  40.53 
 
 
461 aa  328  1.0000000000000001e-88  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  40.53 
 
 
461 aa  328  1.0000000000000001e-88  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  40.53 
 
 
461 aa  328  1.0000000000000001e-88  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  45.43 
 
 
457 aa  328  1.0000000000000001e-88  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_011146  Gbem_2591  two component, sigma54 specific, transcriptional regulator, Fis family  43.01 
 
 
457 aa  328  2.0000000000000001e-88  Geobacter bemidjiensis Bem  Bacteria  normal  0.313706  n/a   
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  41.3 
 
 
463 aa  327  2.0000000000000001e-88  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  43.13 
 
 
471 aa  327  3e-88  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2062  two component, sigma54 specific, transcriptional regulator, Fis family  43.18 
 
 
449 aa  327  3e-88  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000000000000496565 
 
 
-
 
NC_002939  GSU1003  nitrogen regulation protein NR(I)  39.56 
 
 
481 aa  327  4.0000000000000003e-88  Geobacter sulfurreducens PCA  Bacteria  normal  0.158383  n/a   
 
 
-
 
NC_012918  GM21_1405  two component, sigma54 specific, transcriptional regulator, Fis family  40.28 
 
 
478 aa  327  4.0000000000000003e-88  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000117702 
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  40.08 
 
 
464 aa  326  5e-88  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  39.42 
 
 
480 aa  325  8.000000000000001e-88  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  37.3 
 
 
473 aa  325  9e-88  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  44.68 
 
 
464 aa  325  9e-88  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_008463  PA14_62540  two-component response regulator CbrB  44.5 
 
 
478 aa  325  9e-88  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.349279  normal 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  41.05 
 
 
454 aa  325  1e-87  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_3351  two component, sigma54 specific, Fis family transcriptional regulator  40.59 
 
 
465 aa  325  1e-87  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  44.39 
 
 
453 aa  324  2e-87  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_007517  Gmet_2453  two component, sigma54 specific, Fis family transcriptional regulator  39.96 
 
 
461 aa  324  2e-87  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.0000196128  normal 
 
 
-
 
NC_013440  Hoch_2510  two component, sigma54 specific, transcriptional regulator, Fis family  38.96 
 
 
472 aa  325  2e-87  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0791346  normal 
 
 
-
 
NC_011761  AFE_0027  sigma-54 dependent transcriptional regulator/response regulator  39.43 
 
 
455 aa  324  3e-87  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
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