| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Glov_1657 |
|---|
| Symbol | |
|---|
| ID | 6368463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter lovleyi SZ |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010814 |
|---|
| Strand | + |
|---|
| Start bp | 1766648 |
|---|
| End bp | 1768018 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642677061 |
|---|
| Product | two component, sigma54 specific, transcriptional regulator, Fis family |
|---|
| Protein accession | YP_001951893 |
|---|
| Protein GI | 189424716 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0365007 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGAACCA GAATTCTGGT TGTTGATGAT GAATTGAGCA TGCGGGAGTT CATCTCGATC
CTGCTTGAGC GGGAAGGGTA TGAGGTGCTG ACGGCAGCTG ATGCAACCAC AGCGCTTACC
CGACTGGCAG CCTCAGATAT CGATCTGGTG ATTTCTGATG TGCAGATGCC TGGTTTAAGC
GGTCTGGAAC TGCTTGCACG GATCAAGGAA AATAAGCCTG ACACTGCAGT GCTCTTGATT
ACCGCCTTTT CAACGGCCGA GCAGGCGGTT GAGGCGATGA AGCTGGGGGC CTATGATTAC
CTGGCCAAGC CGTTCAAGGT GGATGAGATC AAGATCCTGG TCAAAAACGC CTTGGAAAAG
CGTGATCTGA AACGTGAAAA TCGGCAGCTA CGTGAAAAGG CCGGCGTCTG TGAAGGATAT
GGTGGTATTG TCGGCACATC GCAGCGGATG AAAGAGGTCT TTAACCTGCT GCGTAAGGTC
GCTGAGTCCC AGACCACGGT ACTTGTTTCC GGTGAAAGCG GTACCGGTAA AGAGTTGGCA
GCCAAGGCGA TCCATGAAGG CAGTAGTCGT AAAAACAAAC CGTTTGTGGC GGTGAATTGT
GGTGCCATTC CAGAAAACCT GATTGAAAGT GAACTGTTTG GCCATGTCAA AGGGGCCTTC
ACCGGTGCTG TGGGAGAACG GGCCGGGCTG TTTGAACAGG CAAGCGGCGG TACGGTTTTT
CTTGATGAAA TAGGTGAACT GCCGCTGGCA ATGCAGACCC GCCTGCTACG GGTGATCCAG
GAACGTGAAC TGCGCCGGGT TGGCGGATCC GCCACCAAAA AGGTTGATGT GCGTCTGCTG
GCAGCCTCAA ACCGCGATCT GGCGCTGCAG GTAAAGGAAG GGACCTTTCG CGAGGATCTC
TACTATCGGA TCAATGTCGT CCAGGTGGTG ATGCCACCCC TGCGTGAACG GGTTGAGGAT
ATTCCGCTAT TGGTAGAGCA TCTGGTCAGG AAACATTGCG GTACTGGAGG GATTGTCACT
TCGGAAGCAC TTAAATGCCT GATGGCTTAC CCTTTTCCTG GCAATGTTCG GGAATTGGAG
AATATCATTG AACGCAGCCT GGTGCTTGAT CGAGAACGGA TTACCCTGGA GAGTCTGCCC
GCTCAGGTCA GGGGGGCGAT CAAACGCTTT GACCTGCATG CTGCGGTTGA GATACCTGAT
GAAGGGATTG ATCTGGAGCC TGCCCTTGAA AATCTGGAAA AACAGTATCT GGTCAAGGCA
CTGGAAAAAT CAGGTGGAAG CAAGACCAAG GCAGCCGATC TGCTGGGGAT GTCATTCCGT
TCCTATCGCT ATAAACTGTC CAAATTCGGG CTGGCTGCAG ATGGGGAGTA A
|
|---|
| Protein sequence | MRTRILVVDD ELSMREFISI LLEREGYEVL TAADATTALT RLAASDIDLV ISDVQMPGLS
GLELLARIKE NKPDTAVLLI TAFSTAEQAV EAMKLGAYDY LAKPFKVDEI KILVKNALEK
RDLKRENRQL REKAGVCEGY GGIVGTSQRM KEVFNLLRKV AESQTTVLVS GESGTGKELA
AKAIHEGSSR KNKPFVAVNC GAIPENLIES ELFGHVKGAF TGAVGERAGL FEQASGGTVF
LDEIGELPLA MQTRLLRVIQ ERELRRVGGS ATKKVDVRLL AASNRDLALQ VKEGTFREDL
YYRINVVQVV MPPLRERVED IPLLVEHLVR KHCGTGGIVT SEALKCLMAY PFPGNVRELE
NIIERSLVLD RERITLESLP AQVRGAIKRF DLHAAVEIPD EGIDLEPALE NLEKQYLVKA
LEKSGGSKTK AADLLGMSFR SYRYKLSKFG LAADGE
|
|---|
| |