| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3049 |
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| Symbol | |
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| ID | 4174821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3679949 |
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| End bp | 3681292 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638056075 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_662609 |
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| Protein GI | 109899354 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAAAA CAACGATCCT TATTGTCGAA GATGATGCAG GTTTGCGTGA AGCTTTAGTC
GACACGCTAT TACTTGGCGG ATATAACGTA TTAGCTGCAG ACTGCGCAGA GCGCGGTATG
ATGATGATGA ATGAAGAAGC TATCGATCTG GTCGTGAGCG ACATTCAAAT GGGCGAAATG
AGTGGATTAT CGCTATTACG CAGCTTAAAA AACAAATATC CAAATGTTCC TGTGCTATTG
ATGACAGCCT ATGCCACCAT CGACGATGCA GTTACGGCTA TGCGCGATGG CGCAACGGAT
TACTTATCAA AGCCCTTCGC GCCAGAAGTA TTGCTGAATC TAGTAGGGCG TTATGCGCCT
GCTCAAAAAG TTCTCTCATA CGACCCCATT GTTGCTGACC CAAGTAGTGT TAAGTTACTG
CAACTCGCCC AACGAGTCGC GCAATCTGAT GCAACCGTCA TGGTGCTTGG GCCAAGTGGT
TCAGGCAAAG AGGTGTTAGC CCGGTACATT CACGATCAGT CTTCTCGGGC GGATCAGCCA
TTTGTGGCAA TAAATTGCGC CGCTATTCCT GAAAATATGC TTGAAGCAAC GTTGTTTGGT
TACGATAAAG GTGCCTTTAC TGGCGCTATT CAGGCGTGCC CAGGCAAGTT CGAACAAGCC
CAAGGTGGCA CCATTTTGCT TGATGAAATA AGTGAGATGG ATTTAGGTTT GCAAGCTAAA
TTACTGCGCG TACTCCAAGA AAAAGAAGTA GAGCGCCTCG GTAGCCGTAA AATGATCCCA
CTGGATGTGC GTGTCGTGGC TACTAGTAAC CGGAATATTC GCCAAACGGT GGACGAGGGT
TTATTCCGTG AAGATTTGTA TTATCGTCTT AACGTATTTC CGCTAACGTG GGCGCCCCTT
GATAAACGCC CAGGGGACAT AGTGCCATTA GCGGAGCATT TAGTGGCTCG TCATCGTAGT
AAACAAGGTG CGAGCGCCCT CGGCTTTTCT TCTTCAGCGC GCAGTAAAAT GTTACAGCAT
AGCTGGCCTG GCAACGTACG AGAATTAGAA AATGTTGTGC AGCGAGCGCT CATTTTATGC
GATGGCGAAA AAATCGAAGC TGATGATCTT ATGCTTGAAT CGATCGAAAG TGAGTTAAAC
AATAACCACG AACAAATTAT TGAAGAAGAT GAAAGTAAAT TAGGTTCGGA GCTTCGTCAG
CAAGAGCATC AAATTATCTT GGACACCTTA CAGTCTTGCC AAGGACGCAG GAAAGACGTA
GCAGAACGAT TGGGGATTAG CCCACGCACA CTGCGTTATA AATTAGCTAA AATGCGCGAA
GTAGGTATTG AGTTACCAGC CTAA
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| Protein sequence | MSKTTILIVE DDAGLREALV DTLLLGGYNV LAADCAERGM MMMNEEAIDL VVSDIQMGEM
SGLSLLRSLK NKYPNVPVLL MTAYATIDDA VTAMRDGATD YLSKPFAPEV LLNLVGRYAP
AQKVLSYDPI VADPSSVKLL QLAQRVAQSD ATVMVLGPSG SGKEVLARYI HDQSSRADQP
FVAINCAAIP ENMLEATLFG YDKGAFTGAI QACPGKFEQA QGGTILLDEI SEMDLGLQAK
LLRVLQEKEV ERLGSRKMIP LDVRVVATSN RNIRQTVDEG LFREDLYYRL NVFPLTWAPL
DKRPGDIVPL AEHLVARHRS KQGASALGFS SSARSKMLQH SWPGNVRELE NVVQRALILC
DGEKIEADDL MLESIESELN NNHEQIIEED ESKLGSELRQ QEHQIILDTL QSCQGRRKDV
AERLGISPRT LRYKLAKMRE VGIELPA
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