| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MADE_02891 |
|---|
| Symbol | |
|---|
| ID | 6776878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alteromonas macleodii 'Deep ecotype' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011138 |
|---|
| Strand | - |
|---|
| Start bp | 3141260 |
|---|
| End bp | 3142597 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642756340 |
|---|
| Product | flagellar regulatory protein C |
|---|
| Protein accession | YP_002127181 |
|---|
| Protein GI | 196157692 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAAAA CTACTATCTT AATTGTTGAA GATGACGCGG GGTTGCGCGA AGCACTCTTA
GACACGCTTT TACTCGGCAA CTACAACGTG GTTGAAGCCG ACTGTGCTGA ACAAGCGCTA
ATGATGTTAT CAATGCAAGC GATAGACTTG GTTGTTAGCG ATATCCAAAT GGGTGAAATG
AGCGGCCTTA CGCTTCTTAA GAGTATTAAA GCAAAATATC CGAATATGCC AGTATTGTTA
ATGACCGCTT ACGCCACTGT TAACGATGCG GTGCAAGCAA TGCGCGACGG TGCGACTGAT
TATTTATCTA AGCCATTCGC ACCAGAAGTG CTGCTAAACC TTGTAGGGCG CTACGCACCA
GCACAAAAAA TCGAATCTCG CACGCCAATC GTCGCAGACC CCTCTAGCTT GAAGCTGCTT
GAACTCTCTC GAAAAGTCGC CAAGTCTGAA GCGACGGTAA TGGTGATGGG GCCTAGCGGT
TCAGGTAAAG AAGTGTTATC CCGCTATATA CACGACCAGT CACCGCGCAG CGATGCGCCT
TTTGTGGCCA TTAATTGTGC TGCCATTCCA GAAAATATGT TGGAGGCGAC GCTATTTGGT
TATGAAAAAG GGGCGTTTAC CGGCGCTATT CAGGCTTGCC CGGGTAAGTT TGAACAAGCC
CAAGACGGTA CGCTTTTACT CGATGAAATT ACCGAGATGG ATCTGGCGTT ACAGGCGAAA
CTACTTCGCG TACTGCAAGA GCGTGAGGTG GAAAGGCTTG GCGGTCGCAA AACGGTTAAG
CTAAACGTGC GCGTTATCGC TACAAGCAAT AGAGATTTGA AAAAAGCGGT AGAGGCAGGT
GAGTTCAGAG AAGACTTATA TTACCGCTTA AATGTGTTTC CAATTGAATG GCGACCCTTA
AGTGAGCGCC CCGGCGATAT TGTTCCTCTT GCTGAACACC TTGTGCAGCG CCACGCCAGT
TCACAAGGGT TAGGTTCAAT AAGGCTGAGT GCTGCTGCCC GTAACAAGTT GTCGCAGTAC
GGCTGGCCGG GTAATGTGCG CGAATTAGAA AACGTGGTAC AACGCGCGCT TATCCTTTGT
GAAAATAACG AAATAGACGC CAGTGATCTC ATGATTGACG AAGATATCTC AGCGCCCGTT
GAAGCTGTAC AAGAGCAGGC TGACGAAAAC AGACTAGGCT CAGAGCTGCG TTACCAAGAG
CATCAAATTA TTCTCGATAC ACTGGTGTCG TGCAACGGCA AGCGTAAAGA TGTCGCTGAA
AAGCTGGGTA TTAGCCCTCG TACGTTGCGT TATAAACTTG CTCGAATGCG TGAAGACGGC
ATCGAAGTAC CTGCATAA
|
|---|
| Protein sequence | MSKTTILIVE DDAGLREALL DTLLLGNYNV VEADCAEQAL MMLSMQAIDL VVSDIQMGEM
SGLTLLKSIK AKYPNMPVLL MTAYATVNDA VQAMRDGATD YLSKPFAPEV LLNLVGRYAP
AQKIESRTPI VADPSSLKLL ELSRKVAKSE ATVMVMGPSG SGKEVLSRYI HDQSPRSDAP
FVAINCAAIP ENMLEATLFG YEKGAFTGAI QACPGKFEQA QDGTLLLDEI TEMDLALQAK
LLRVLQEREV ERLGGRKTVK LNVRVIATSN RDLKKAVEAG EFREDLYYRL NVFPIEWRPL
SERPGDIVPL AEHLVQRHAS SQGLGSIRLS AAARNKLSQY GWPGNVRELE NVVQRALILC
ENNEIDASDL MIDEDISAPV EAVQEQADEN RLGSELRYQE HQIILDTLVS CNGKRKDVAE
KLGISPRTLR YKLARMREDG IEVPA
|
|---|
| |