| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1340 |
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| Symbol | |
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| ID | 4478854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1553017 |
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| End bp | 1554357 |
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| Gene Length | 1341 bp |
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| Protein Length | 446 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725895 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_868980 |
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| Protein GI | 117919788 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.598769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG CCAAATTACT CTTAGTCGAA GACGATGCCT CCCTGCGTGA GGCTTTGCTC
GATACCTTAA TGTTGGCGCA ATACGACTGT ATTGATGTGG CATCAGGTGA AGAAGCCATA
ATCGTACTAA AACAACATCA ATTTGATCTT GTGATCAGCG ATGTGCAAAT GCAGGGGATT
GGCGGCTTAG GCTTATTAAA TTACTTACAG CAACATCATC CCAAATTGCC CGTGCTGTTA
ATGACGGCGT ACGCCACTAT AGGCAGTGCT GTCAGTGCAA TTAAATTGGG CGCCGTCGAT
TATCTGGCAA AACCCTTCGC TCCAGAGGTG TTGCTCAATC AAGTTTCCCG CTATTTACCA
CTCAAACAAA ATAGCGATCA ACCTGTGGTT GCCGATGAAA AGAGTCTTGC GCTCTTGTCT
CTGGCACAGC GGGTGGCAGC ATCCGATGCT TCTGTGATGA TCCTTGGGCC AAGTGGTTCG
GGTAAAGAAG TGTTAGCCCG TTATATTCAT CAACATAGTA GCCGTGCTGA CGAGGCCTTT
GTGGCCATCA ACTGTGCGGC CATCCCCGAG AATATGCTTG AAGCCACATT ATTTGGTTAT
GAAAAGGGCG CCTTTACCGG TGCTTACCAA GCTTGCCCCG GTAAATTCGA ACAAGCACAG
GGCGGAACTT TATTACTCGA TGAAATTTCA GAGATGGATT TAGGGTTACA GGCCAAACTG
CTGCGCGTAT TGCAAGAGCG TGAAGTAGAG CGGTTAGGCG GCCGTAAAAC CATCAAGCTG
GATGTGAGAG TGCTAGCAAC CTCAAATCGT GATTTAAAAG CCGTAGTTGC CGCGGGGCAA
TTTAGGGAAG ATCTCTATTA TCGCATTAAC GTGTTTCCAT TGACGTGGCC TGCGCTGAAT
CAACGGCCTG CGGATATTTT ACCCTTAGCT CGGCATTTAC TCACAAAACA CGCAAAGGCA
CTGAGTATCA TCGACGTACC CGAATTTGAT GAGGCCGCAT GCCGCCGTTT ACTTGGCCAT
CGCTGGCCAG GTAATGTGCG AGAGCTCGAT AACGTTGTGC AGCGAGCCTT GATTTTGCGA
TCAGGTACGG TGATTACTGC CAATGACATT ATTATTGATG CTCAAGATGT GCCGTTATCA
TCCGATGATG CTGAATATTG CAGTGAGCCA GAGGGGTTAG GTGAAGAGTT AAAGGCGCAG
GAACATGTGA TCATTCTCGA AACCCTAGCG CAATGCCAAG GCAGCCGTAA GTTGGTTGCT
GAGAAACTAG GGATCAGCGC GCGCACCTTA AGATACAAGA TGGCCAGAAT GCGCGATATG
GGGATTCAAT TGCCTAACTA A
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| Protein sequence | MSEAKLLLVE DDASLREALL DTLMLAQYDC IDVASGEEAI IVLKQHQFDL VISDVQMQGI
GGLGLLNYLQ QHHPKLPVLL MTAYATIGSA VSAIKLGAVD YLAKPFAPEV LLNQVSRYLP
LKQNSDQPVV ADEKSLALLS LAQRVAASDA SVMILGPSGS GKEVLARYIH QHSSRADEAF
VAINCAAIPE NMLEATLFGY EKGAFTGAYQ ACPGKFEQAQ GGTLLLDEIS EMDLGLQAKL
LRVLQEREVE RLGGRKTIKL DVRVLATSNR DLKAVVAAGQ FREDLYYRIN VFPLTWPALN
QRPADILPLA RHLLTKHAKA LSIIDVPEFD EAACRRLLGH RWPGNVRELD NVVQRALILR
SGTVITANDI IIDAQDVPLS SDDAEYCSEP EGLGEELKAQ EHVIILETLA QCQGSRKLVA
EKLGISARTL RYKMARMRDM GIQLPN
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