| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maqu_1999 |
|---|
| Symbol | |
|---|
| ID | 4654382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinobacter aquaeolei VT8 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008740 |
|---|
| Strand | - |
|---|
| Start bp | 2226229 |
|---|
| End bp | 2227674 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639811970 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_959267 |
|---|
| Protein GI | 120554916 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGG CCCAGATTCT GATTGTGGAA GATGACCACG ACCTGCGCGA AGCTTTGGTA
ACGACGCTGG AACTGGCGAA ATTCCAGGTG CGGGAAGCGG CCAGCGCTGA AGATGCGCTG
GCAAGCCTGG CCCGGGCGCC GGTCGATATG GTGGTCAGCG ATGTCAATAT GCCCGGCATG
TCCGGCCATG AGTTGTTGGC GGAAGTTCAG CGCTTGTATC CGGGGCTGCC CATGATGCTG
ATTACCGCGT ACGGCCAGAT CAGCCACGCG GTGTCTGCCA TGCAATCTGG TGCCATCGAT
TATCTGGTCA AGCCGTTTGA GCCTCAGGTT CTGGTGGAAG CGGTCAGTCG GGTCGTGGGC
GGAAGCCGCC AGAAGGCTGG CGATGAGCCG GTGGCTGAGG ATCCTGTCAG CAAACGCATG
TTCCAGTTGG CCGCGAAAGT GGCGGCCAGT GATTCCACAG TGATGATTTC CGGTGAGAGT
GGTACCGGTA AAGAAGTGTT GGCCCGCTAT ATCCATCAGC AGTCACCCCG AGCGGATGAG
CCGTTTGTCG CGATCAACTG TGCCGCTATT CCGGAGAATA TGCTGGAAGC CATTCTGTTC
GGTCACGAGA AAGGTGCATT CACGGGTGCC GTTGCAGCCT CCCCAGGTAA ATTCGAGCAG
GCCAATGGCG GAACCATCCT GTTGGACGAG ATTTCCGAAA TGGATCTTGG TTTGCAGTCC
AAGCTGCTGC GAGTGTTGCA GGAGCGGGAA GTGGAGCGCG TCGGTGGTCG CAAGACCATT
CAGCTGGATG TTCGTGTGCT GGCGACCACA AACCGTGATC TGGCGGACTA CGTGCGCGAG
GGCAAGTTCC GCGAAGACCT TTATTATCGA TTGACGGTGT TTCCGATGCG GTGGCAGCCC
CTGCGGGAGC GGCCGCTGGA TATTCTGCCC CTGGCCCGTT CACTGTTGAA AAAGCATTGC
CGCAAGATGA AGCTGACCGG CATCACCCTG GCCGAGGATG CCCGTAAGGC ACTGATGGCT
CATGCCTGGC CGGGTAATGT CCGGGAACTG GACAATGCCA TTCAGCGGGC GCTGGTGTTG
CATCAGGGTA ATGTAATCCA TGCCGGCGAT CTTTGTCTGG AGCTTGGGAT TACCGGTGCC
GCTGACTTTG GTGCACCCGC CGAGCCCGCC ATTTCCGCCA GATCCATTGA GGTCCAAGCG
GCCGACTTGC CAGACCCCGA GGCGGGGCTG GAAGCGGATT CAGCGGCTGA TGAGGCGATT
GGCTCACTCG GAGATGATCT GCGCCAACAG GAGTTCCGTA TTATTATCCA GACCCTCAAG
AAAGAGCGTG GCAGGCGCAA CCGGGCAGCG GAGCAGTTGG GCATCAGCCC GCGAACGCTT
CGTTACAAAC TGGCCCAGAT GCGAGATGCC GGTATCGATC TTGATGCGGA GCTGGCCATG
GCCTGA
|
|---|
| Protein sequence | MAKAQILIVE DDHDLREALV TTLELAKFQV REAASAEDAL ASLARAPVDM VVSDVNMPGM
SGHELLAEVQ RLYPGLPMML ITAYGQISHA VSAMQSGAID YLVKPFEPQV LVEAVSRVVG
GSRQKAGDEP VAEDPVSKRM FQLAAKVAAS DSTVMISGES GTGKEVLARY IHQQSPRADE
PFVAINCAAI PENMLEAILF GHEKGAFTGA VAASPGKFEQ ANGGTILLDE ISEMDLGLQS
KLLRVLQERE VERVGGRKTI QLDVRVLATT NRDLADYVRE GKFREDLYYR LTVFPMRWQP
LRERPLDILP LARSLLKKHC RKMKLTGITL AEDARKALMA HAWPGNVREL DNAIQRALVL
HQGNVIHAGD LCLELGITGA ADFGAPAEPA ISARSIEVQA ADLPDPEAGL EADSAADEAI
GSLGDDLRQQ EFRIIIQTLK KERGRRNRAA EQLGISPRTL RYKLAQMRDA GIDLDAELAM
A
|
|---|
| |