Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_0437 |
Symbol | |
ID | 6208800 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 512358 |
End bp | 513830 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641690059 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001817327 |
Protein GI | 182412261 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTTTG AGAAGATACT GATCGTCGAG GACGAACTCG TCGTCCGCAA TCTGCTCCAG AGCATTTTCC AGCGACACAA GCTGCCGGTG ACGTGTGCGA ACAACCTGGC GGAGGCCACC GCCCAATTGC AGCGGGAGCA GTTTGACTTG ATGATGCTGG ACATCCGGCT GCCCGACGGC GACGGCCAGA AATTCCTCGA GCAGGTCGCG GCGATGCCGG AGCGGCCGCT GGTGGTGATG GTGACCGGCT ACGGTTCCGT GGAGTCCGCG GTGGGCTGCA TGCGGGCCGG GGCGTTCGAC TATGTGCTGA AACCTTTTTC GCCCAGCCAG ATCGACGTCA TTCTCAAAAA GGCGCAAACC TACCGCCAGT TGCTGCGGGT CAACCGGCTG TTGAGCGACG ACCCGGAGGA TGAGGAGGGG ATTCTCGTCG GCCGCAGCCC AGCGATGATC CGGCTGCGGC AGATCATCGA GCGCGTTGCG CCGACGGACG CCACGGTGCT GATCACGGGA GAGAGCGGTA CGGGCAAGGA GATGGTCGCA CGCGAATTCT ACCGCCGCAG CCCGCGGCGC AGCCAGGCGT TCATCAAGGT CAATTGCGCG GCGATTTCGG AGAACCTCAT CGAGAGCGAG TTCTTCGGTC ATGAGCGGGG CGCATTCACC GGCGCGACGG AGCGACGCGA GGGACGGTTC GAGCTCGCAC ACCAGGGAAC GCTGCTGCTG GACGAGGTGA GCGAGATTCC AGCCAACCTG CAGGCCAAGC TGCTCCGCGT GCTGCAAGAG CGCGAATTCG AGCGCGTGGG CGGGAGCCGC ACGATCAAGG TGAACGTTCG CATCATCGCC ACCTCGAATC GCGACCTGAT GCGGCACGTG GAGAAAGGCG AGTTTCGCCA GGATCTTTAT TATCGACTGA ACGTTTTCCC CGTCCACGTG CCGGCTCTCC GCGAGCGGCC CGAGGACATC GCGCTGCTGG CGGATCATTT CCTGCGCCGG TTCGCCCGCA AGCACGGCGT CAAGGTCACC GGCTTCGCTG ATTCAGCCCG AGCGGCGCTG ATTGGTTACC GCTGGCCGGG CAACGTGCGT GAGCTGCAGA ACACGGTGGA GCGGGCGGTC ATTCTCTCGG AAACCGGCCG CGCGGTGACC GCGGCCGCCT TGGGCCTGCC GGGCGACTTC CTGCCCGGCG AGCTCCCGCT GGAACCCGCG CCGGCGCCCG AAGTGCCCGC GCTACCTGTG GCGGCGGTGG CCGAGGAACC AGCCGGCGCG AGCCCCACTG TGACCGACAG CCATGGGCAG GTCTTGAAGC TCGACGAGCT CGAAAAACAA GCGATTCGGG CGGCATTGCG CCAGACCGGG GGCAATCGCA CTCAAGCCGC GGCGGAACTT GGCATCAGCA TCCGGACCCT GCGGAACAAG TTGCAGGAAT ACCGGCTTGC GGGTGATCCG GTGGACGCCG ATTTCGCTTC GATCGACAGT TGA
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Protein sequence | MSFEKILIVE DELVVRNLLQ SIFQRHKLPV TCANNLAEAT AQLQREQFDL MMLDIRLPDG DGQKFLEQVA AMPERPLVVM VTGYGSVESA VGCMRAGAFD YVLKPFSPSQ IDVILKKAQT YRQLLRVNRL LSDDPEDEEG ILVGRSPAMI RLRQIIERVA PTDATVLITG ESGTGKEMVA REFYRRSPRR SQAFIKVNCA AISENLIESE FFGHERGAFT GATERREGRF ELAHQGTLLL DEVSEIPANL QAKLLRVLQE REFERVGGSR TIKVNVRIIA TSNRDLMRHV EKGEFRQDLY YRLNVFPVHV PALRERPEDI ALLADHFLRR FARKHGVKVT GFADSARAAL IGYRWPGNVR ELQNTVERAV ILSETGRAVT AAALGLPGDF LPGELPLEPA PAPEVPALPV AAVAEEPAGA SPTVTDSHGQ VLKLDELEKQ AIRAALRQTG GNRTQAAAEL GISIRTLRNK LQEYRLAGDP VDADFASIDS
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