| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1180 |
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| Symbol | |
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| ID | 4278448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1389924 |
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| End bp | 1391273 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638133955 |
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| Product | two component, sigma54 specific, transcriptional regulator, Fis family protein |
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| Protein accession | YP_749871 |
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| Protein GI | 114562358 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTGAAG CAAATATTTT ATTAGTTGAA GATGATGCCG ATTTACGCGA GGCATTGCTT
GATACTCTCA TGCTTGCCCA TTATGACTGT GTCGATGTAG GTAGCGCTGA AGAGGCCATT
CTGGCCTTGA AAGCAAACCA TTTTGATATG GTGATTAGCG ATGTGCAGAT GGACGGTATT
GGTGGTATCG GGTTGTTGGG TTATTTACAA CAGCATCAAC CTAAACTGCC AGTATTGTTA
ATGACCGCTT ATGCCACTAT TAACAGTGCT GTGAATGCGA TGAAATTAGG TGCAGTGGAT
TATTTGGCTA AACCGTTTGC GCCTGAAGTG TTATTGAATC AGGTGTCACG TTATTTACCT
TTAAAACAAA ATCATGATAA ACCCGTGGTC GCAGATGAGA AAAGTTTAGC GCTGTTGTCG
CTGGCTCAGC GGGTAGCAGT ATCTGATGCA TCGGTAATGA TTATGGGTCC TAGTGGCTCA
GGTAAAGAAG TGTTAGCGCG CTATATTCAC CAACATAGTC AACGCCATGA CCAACCATTT
ATTGCGATTA ACTGCGCTGC AATCCCAGAA AACATGTTAG AAGCCACTTT ATTTGGTTAC
GAGAAAGGTG CATTTACTGG CGCTTATCAA GCCTGCCCAG GTAAGTTTGA ACAAGCCCAA
GGCGGCACTA TATTACTTGA TGAAATATCT GAGATGGAAC TTGGCTTACA AGCTAAATTG
CTCAGGGTAT TACAAGAGCG CGAAGTAGAG CGTTTAGGTG GCCGCAAAAC CATTAAACTT
GATGTGCGAG TGTTGGCAAC CTCAAACAGA GATTTAAAAG CCATGGCGAC CTCTGGTGAG
TTTAGGGAAG ATTTATACTA CCGAATTAAT GTGTTTCCGT TAACGTGGCC AGCGCTGCAT
CAGCGTCCTG CTGATATATT ACCGCTTGCA CGGCATTTGC TGATTAAACA TGCTAAAGCA
TTTAATATGG CTTCTGTGCC TAAGCTTGAT GATGCTGCCA CTCGGCGTTT ATTGACTCAT
CGATGGCCTG GTAACGTGCG CGAGTTAGAT AATGTTATTC AACGAGCGCT AATATTACGG
GTTAATGATG ATATTGGTGT CAATGACATT ATTTTAGATT GTGCCGATGT GAGTTTAGTT
GCAACTGAAT GTGTTGATGC GGATAAGCCA GCCGAAGTTG ACGGTTTAGG TGACGAACTA
AAAGCCCAAG AACATGTCAT TATTTTAGAA ACTCTAAATC AATGTCAGGG CAGTCGGAAA
ATGGTCGCTG AAAAACTCGG TATAAGCGCC CGTACGCTAC GTTATAAAAT GGCCAAAATG
CGTGATATGG GTATTCAATT ACCTGCTTAA
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| Protein sequence | MAEANILLVE DDADLREALL DTLMLAHYDC VDVGSAEEAI LALKANHFDM VISDVQMDGI
GGIGLLGYLQ QHQPKLPVLL MTAYATINSA VNAMKLGAVD YLAKPFAPEV LLNQVSRYLP
LKQNHDKPVV ADEKSLALLS LAQRVAVSDA SVMIMGPSGS GKEVLARYIH QHSQRHDQPF
IAINCAAIPE NMLEATLFGY EKGAFTGAYQ ACPGKFEQAQ GGTILLDEIS EMELGLQAKL
LRVLQEREVE RLGGRKTIKL DVRVLATSNR DLKAMATSGE FREDLYYRIN VFPLTWPALH
QRPADILPLA RHLLIKHAKA FNMASVPKLD DAATRRLLTH RWPGNVRELD NVIQRALILR
VNDDIGVNDI ILDCADVSLV ATECVDADKP AEVDGLGDEL KAQEHVIILE TLNQCQGSRK
MVAEKLGISA RTLRYKMAKM RDMGIQLPA
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