| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TK90_1156 |
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| Symbol | |
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| ID | 8806918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thioalkalivibrio sp. K90mix |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013889 |
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| Strand | + |
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| Start bp | 1232367 |
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| End bp | 1233740 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003460401 |
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| Protein GI | 289208335 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.00283001 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAGAG CGACCATTCT CCTAGTCGAT GCGGAACCCG CGCTGCGCGA GGCGGTGGTC
CGTGTATTGG CGACGATCCC GCGTGTGCGG CTGGAATCCT GTCGGGGCGA GGCGCTACCG
GTCGCGCTGG AGACCCATCG TCCGCGGGCG GTGCTGGTGG CGCGCAGGGG CGTCCCGGGC
AATTGGGCCG AACTGGGTGC GCGGATGCCG GTCGCCGCGG TCGGGCATGA CGCCACGCAG
GACGACGAGA TCGGGGCCTT GCGCGAAGGG CTGGCCGCGC ATTTCGCGCT TCCCGACATG
GCGGAGGCGA TGGCTGACTG GTTGCGTTCG GTGGCCAAGC CATCGCCCAG CATCGTGGTG
CCGCGGATGG TGGCGCAAAG CGCCTCGATG CAGTTGCTGG ATGCGTTCGT GTCGCGGATC
GCGGCCAGCC CGGCGACGGT TTTCGTCACC GGCGAATCAG GCGTTGGCAA GGAGGTTCTG
GCCCGCCAGG TACATGCCCG CTCACCACGT GCGAACGGTC CGTTCGAGGC GGTCAACTGC
GCGGCGCTTC CGGAGACCAT GCTGGAGGCC CTGTTGTTCG GGCATGCGAA GGGGGCGTTT
ACCGGGGCGC TGGAGGCGCG GCCCGGTAAA TTCGCCCAGG CCCATGGCGG GACGCTGCTG
CTCGACGAGG TCACGGAGAT ACCGGTGAAC CTGCAGGCCA AGCTGCTGCG GGTATTGCAG
GAACGCGAGG TGGAGCCACT GGGAGGCCGG CAGGCCCGCC GCGTGGACGT GCGGGTGATC
GCGACGTCGA ACCGCGACCT GCGCGAGGCA CTGGCGGAAG GAGAGCTGCG CGAGGACCTC
TACTATCGCC TGAACGTTTT TCCTGTCTGG ATCCCGCCGC TGCGCGAGCG CCCGGAGGAT
ATCGTGCCGC TGGCGCGTAC CCTGCTGCGC CGGTTGAGCG GCAATACCTT GACCGATCTC
GATGCGTCCG CCCGGAAACG GCTGGTGGAA CACGACTGGC CGGGTAATGT GCGCGAGCTG
GCTAACGTGA TGGAACGCGC GGTGACCCTG CACGATGCGG CGCGCGGCTG CGTGATCGGG
ATCGAGGCGA TCTGGCTGGA CCTGGACATG CTGATGCCCT GGGGCACGCA CGAGTGTCGG
GCATCGGACG CTTCAGCGCC CACTGACCGC GACTCGATCG ACGAGAACTC GACGCCCATG
CTGGAACAGA CCCTGCAGAC ACAGGAGAGT CGGGTGATTC TCAATGTCCT GCGCGAGTCG
GGCGGACGGC GCAAGGAGGC GGCGGAACGT CTGGGCATCA GCCCCAGAAC ATTGCGTTAC
AAGATTGCCC GGTTGCGGGA ATCGGGCTTC GCGGTTCCTT CGTCGAGTCA CTAG
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| Protein sequence | MSRATILLVD AEPALREAVV RVLATIPRVR LESCRGEALP VALETHRPRA VLVARRGVPG
NWAELGARMP VAAVGHDATQ DDEIGALREG LAAHFALPDM AEAMADWLRS VAKPSPSIVV
PRMVAQSASM QLLDAFVSRI AASPATVFVT GESGVGKEVL ARQVHARSPR ANGPFEAVNC
AALPETMLEA LLFGHAKGAF TGALEARPGK FAQAHGGTLL LDEVTEIPVN LQAKLLRVLQ
EREVEPLGGR QARRVDVRVI ATSNRDLREA LAEGELREDL YYRLNVFPVW IPPLRERPED
IVPLARTLLR RLSGNTLTDL DASARKRLVE HDWPGNVREL ANVMERAVTL HDAARGCVIG
IEAIWLDLDM LMPWGTHECR ASDASAPTDR DSIDENSTPM LEQTLQTQES RVILNVLRES
GGRRKEAAER LGISPRTLRY KIARLRESGF AVPSSSH
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