| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0085 |
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| Symbol | |
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| ID | 5660486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 94655 |
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| End bp | 95962 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234598 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001499949 |
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| Protein GI | 157959915 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCTT CTAGTTTAAG ATTTGTCGAT GCAGATCTAA CCCTATCTTG CCAAAATAGA
CTGGTTCAAC AGGGCTTTAA TTTATACTTG CCTGATGATA AAGATAGCCC TTGGTTAAGT
TTGATCAACC TTTCTCATTG CGCGAGTCAG GATGTACCCG TACGGCTACG ACAATTTCCA
GGTAAGCACC AAGTCGCCCT GCTCAATCCA GAGCAAACCG AGCTTGCCAG TATCGCCATG
CAGTGTGGTG TACAAGATTA CCTGTTACTG CCAATTGATG CAGAGCAACT GTGCTCACTA
CTACAAAGAT TACGTCGTTT AGAACTGCCC AATAATGAGT TAATTTGCGC GGCTCCGGTT
AGCCGCCAGC TGCTAATGCT AGCTCACCGA GCTGCGAGCA CAGAGGCCAC AGTACTACTC
ACCGGCGAAA GCGGCACAGG TAAAGAGCCG CTAGCTCGTT ATATTCACCG CCATTCCAAC
CGTGCCGATA AGGCTTTTAT CGCAATCAAC TGCGCAGCTA TTCCTGAAAG CATTCTAGAA
TCTATCCTGT TTGGTCACAT CAAGGGGGCA TTTACGGGTG CCACAACCGA CCAGCCCGGT
AAGTTCGAAC TCGCCAACGG CGGAACGTTA CTGCTCGATG AAATCGGTGA GATGCCTCTG
CTTTTACAAG CCAAACTACT GCGTGTACTG CAAGAGAGAG AGGTTGAGCG ATTAGGCAGT
CACAGGTCAA TTGCGTTAGA TATTCGGGTC ATTGCCGCCA CCAACAAAGA TCTGCGTCAA
GCGGTGCAAG ATGGCAAATT CAGAGAAGAC CTCTTCTATC GCTTAGATGT ACTGCCGATA
AAGATATTAC CACTGCGTCA GAGACGCGAA GACATTCTGC CCATTGCCGA ACATTTTCTA
CAGCGATACA AAATTCTTGC GGCAAATCAG CAATGCTACT TCAGTGAGCA GGCTCGAAAC
TTACTGTTAA GCCACAACTG GCCCGGCAAT GTGCGCGAAC TAGAAAATAC CATCCAACGC
GCGCTGGTTA TGCGACGTGG TCAAGCATTA CAAGCCGAAG ATCTCGGCCT CGAAAATCAA
GACGGTTCAA TCTTAGTAGA ACAAAATGAG TTAGGGCTTA AGGCCTCTAA ACGTCAGGCT
GAGTTCCAAT ACATTATTGA CACGCTTAAG CGCCACAACG GCCATAGGAT CCAAACGGCT
GAGGCCTTGG GAATGACGAC ACGAGCATTG CGATACAAGC TGGCTCAAAT GCGAGAAGAA
GGGATCGATA TTGAACGCCT CCTCGCTCAA GCAGGTCATG CTGCGTAA
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| Protein sequence | MNPSSLRFVD ADLTLSCQNR LVQQGFNLYL PDDKDSPWLS LINLSHCASQ DVPVRLRQFP
GKHQVALLNP EQTELASIAM QCGVQDYLLL PIDAEQLCSL LQRLRRLELP NNELICAAPV
SRQLLMLAHR AASTEATVLL TGESGTGKEP LARYIHRHSN RADKAFIAIN CAAIPESILE
SILFGHIKGA FTGATTDQPG KFELANGGTL LLDEIGEMPL LLQAKLLRVL QEREVERLGS
HRSIALDIRV IAATNKDLRQ AVQDGKFRED LFYRLDVLPI KILPLRQRRE DILPIAEHFL
QRYKILAANQ QCYFSEQARN LLLSHNWPGN VRELENTIQR ALVMRRGQAL QAEDLGLENQ
DGSILVEQNE LGLKASKRQA EFQYIIDTLK RHNGHRIQTA EALGMTTRAL RYKLAQMREE
GIDIERLLAQ AGHAA
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