| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4389 |
|---|
| Symbol | |
|---|
| ID | 5376952 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 5132718 |
|---|
| End bp | 5134205 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640845917 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_001381551 |
|---|
| Protein GI | 153007226 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.205713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.107293 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGG CACACCTTCC AAAAAACGAG AGCGGGCGGG CGAGCGTCCC GGCGGGAGCG
TCGGTTAGAC TCTCGCCCCC GATGGCCCGC ATCCTCATCG CCGACGACCA CGACGCGGTC
CGCGAGGGCA TGGCGATCGC CCTCTCGCGC CTCGGCCACG ACGTCCTCGC CGTCCGCGGC
GGCGCCGAGG CGATCGCCGC CTACCGCAAG AAGCCGGCGG ACGTGGTGGT CACCGACCTG
CGCATGGTCC CGGTGGACGG GATCGAGGTG GTGAGGCGCC TGCGCGAGCT CGACCCGGAC
GCGACGGTGC TCGTCGTGTC GGCCCACGGC ACCATCGCGG TCGCGGTCGA GGCGATGCGC
GAGGGGGCGA TCGACTTCAT CGAGAAGCCG TTCTCGCCCG ACGTGCTCCG CGCGCGCGTG
GAGAAGTCCA TCGAGATCGC CCGCGAGCGG AAGGGGGCGC GCACCGCCCG CGCCCGGGCC
GAGGCGCTCG AGGAGGACCT CGGGCGCGAT CGCGCGCACG GCCTCGTGGG GAGCTCCGAG
CCGATGCGGC GCGTGCTCGA CCAGGTGCGC AAGGTGGCCT CCACCGGCGC GACCGTGCTC
GTGCTCGGCG AGTCCGGGAC CGGCAAGGAG CTCGTGGCGC GCGCCATCCA CGACGCGAGC
CCGCGGCGCG AGCAGCCGTT CGTCTCCATC TCCTGCGCCG CCATCCCGGA GGGCCTGCTC
GAGTCGGAGC TGTTCGGCCA CGAGAAGGGC GCCTTCACCG GCGCCATCCG CCGCAAGCTC
GGCCGGTTCG AGCTGGCCAA CGGCGGCACG CTCTTCCTCG ACGAGGTCGG CGAGATCCCG
CATGCGGTGC AGGTGAAGCT CCTGCGCGTC CTGCAGGAGC GCCAGTTCGA GCGGGTCGGC
GGCGAGGAGA CGGTGGAGGT GGACGTGCGG GTGGTCTCCG CCACGAACCG CAACCTCGCG
CAGATGGTGG AGTCGGGCCG CTTCCGGGAG GACCTCTACT ACCGCCTGAA CGTGGTCCCC
ATCCTGCTCC CCCCGCTGCG CGATCGCCCC GGCGACGTCG AGGAGCTCGC GCGGTTCTTC
GTCGCGCGGC TGGCGCCGCG CATGAGCCGG GCGGTCACCG GCCTCGCCCC CGAGGCGCTC
GAGCTGCTGC GCCGCCACCG CTGGCCCGGC AACGTGCGCG AGCTCGAGAA CGTGATCGAG
CAGGCGCTGG TGTTCGCCGA GGGCGAGCTG GTGCGGCCGC GCGACCTGCC CGAGGGCGTC
CGCAAGGCGC CGCCCGCGCC GTCGCTGCCG GTGCCGAGCG GCGACCGGAG CCTCACCGAC
ATCCTGGAGG ACCTCGAGCG GCAGCTCATC CTCGCCGCCT ACGAGAAGGC GCGCGGGGTG
AAGGCGGAGA CGGCGCGCCT CCTCGGCATC AAGCCGTCCG CGCTCTACTA CAAGCTCGAG
AAGTACGGGA TCGTGAAGGC GGGCGAGAAG GCGGAGGAGA CGTCCTGA
|
|---|
| Protein sequence | MSQAHLPKNE SGRASVPAGA SVRLSPPMAR ILIADDHDAV REGMAIALSR LGHDVLAVRG
GAEAIAAYRK KPADVVVTDL RMVPVDGIEV VRRLRELDPD ATVLVVSAHG TIAVAVEAMR
EGAIDFIEKP FSPDVLRARV EKSIEIARER KGARTARARA EALEEDLGRD RAHGLVGSSE
PMRRVLDQVR KVASTGATVL VLGESGTGKE LVARAIHDAS PRREQPFVSI SCAAIPEGLL
ESELFGHEKG AFTGAIRRKL GRFELANGGT LFLDEVGEIP HAVQVKLLRV LQERQFERVG
GEETVEVDVR VVSATNRNLA QMVESGRFRE DLYYRLNVVP ILLPPLRDRP GDVEELARFF
VARLAPRMSR AVTGLAPEAL ELLRRHRWPG NVRELENVIE QALVFAEGEL VRPRDLPEGV
RKAPPAPSLP VPSGDRSLTD ILEDLERQLI LAAYEKARGV KAETARLLGI KPSALYYKLE
KYGIVKAGEK AEETS
|
|---|
| |