| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1616 |
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| Symbol | |
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| ID | 6115857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 2007325 |
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| End bp | 2008683 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633099 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001759997 |
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| Protein GI | 170725971 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGAAG GTAAACTATT ATTGGTCGAA GATGATCACT CTCTTCGTGA AGCCCTATTA
GACACTCTTT TGATAGCTCA TTATGACTGT GTGGATGTTG CTTCTGCAGA GGATGCCATT
GTTAAGCTTA AACACGAGTC ATTTGATATG GTGATAAGTG ATGTGCAGAT GGAGGGAGTG
GGTGGTTTAG GCTTACTAAA TTACCTTCAA CAACATCACC CACAGTTACC TATGTTACTT
ATGACAGCAT ATGCAACGAT AGATAATGCT GTAAATGCTA TTAAGCTTGG GGCTGTCGAT
TATTTAGCGA AGCCCTTTGC ACCAGAGGTT TTGTTGAATC AAGTCTCTCG TTATCTCAAG
CCAAAATTGT GTCAAACACA ACCTGTTGTT GCTGATGAAA AGAGTCTAGC GCTACTCTCT
TTAGCACAGA AAGTGGCAGC TTCAGATGCT TCAGTGATGA TCATGGGGCC AAGTGGTTCA
GGTAAAGAGG TATTGGCTAG GTTTATTCAC CAAAACAGCC CCCGTGCAGA GCAACCTTTT
GTCGCGATTA ACTGTGCAGC AATTCCTGAA AATATGCTTG AAGCAACTCT ATTTGGCTAT
GAAAAAGGGG CTTTCACCGG TGCTTATCAG GCCTGTCCTG GTAAATTTGA ACAGGCGCAG
GGAGGAACCT TGCTACTTGA TGAGATCTCT GAAATGGAGC TAGGCCTACA GGCTAAGTTA
CTAAGGGTAC TTCAAGAGAG AGAGGTGGAG CGAATTGGCG GCCGCAAGAA TATCAAGTTA
GATGTGAGGG TATTGGCAAC CTCAAACCGC GATCTTAAAT CTATGGCAGC ATCAGGTGAC
TTTAGAGAAG ATCTCTATTA CAGAATAAAT GTGTTTCCTT TAGTCTGGCC TTCGTTAAAT
CAAAGGCCAG CAGATATACT ACCACTGGCT CGTCATCTGC TGCTTAGGCA TGCAACGACA
TCAGGGATGT CGGAGATCCC TGATTTTGAA GAGAGCGCTT CTCGTCGCCT GCTGACTCAC
CGATGGCCTG GTAATGTCCG AGAGTTAGAT AATGTGATTC AGAGAGCCTT AATTCTCTTC
ACTGGCGGGA ATATAACCGC CAATGAGATC ATAATCGATG CGGACGAAGT GATGCTTACT
CAGGATGTGA AGTGTCATAC TAGCACTCAA GAGAGCTCGC TGGAGTTGGA TGCACTCGGA
GATGAGCTAA AAGCTCAAGA ACACGTGATC ATTCTAGAAA CTTTGACCCA GTGTCAAGGT
AGTCGTAAGC TCGTTGCTGA GAAGCTAGGT ATTAGCGCCA GAACTCTTAG GTATAAAATG
GCCAAGATGA GAGATGCTGG TATTCAGATC CCTGCATAA
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| Protein sequence | MSEGKLLLVE DDHSLREALL DTLLIAHYDC VDVASAEDAI VKLKHESFDM VISDVQMEGV
GGLGLLNYLQ QHHPQLPMLL MTAYATIDNA VNAIKLGAVD YLAKPFAPEV LLNQVSRYLK
PKLCQTQPVV ADEKSLALLS LAQKVAASDA SVMIMGPSGS GKEVLARFIH QNSPRAEQPF
VAINCAAIPE NMLEATLFGY EKGAFTGAYQ ACPGKFEQAQ GGTLLLDEIS EMELGLQAKL
LRVLQEREVE RIGGRKNIKL DVRVLATSNR DLKSMAASGD FREDLYYRIN VFPLVWPSLN
QRPADILPLA RHLLLRHATT SGMSEIPDFE ESASRRLLTH RWPGNVRELD NVIQRALILF
TGGNITANEI IIDADEVMLT QDVKCHTSTQ ESSLELDALG DELKAQEHVI ILETLTQCQG
SRKLVAEKLG ISARTLRYKM AKMRDAGIQI PA
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