More than 300 homologs were found in PanDaTox collection
for query gene Mmc1_0300 on replicon NC_008576
Organism: Magnetococcus sp. MC-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008576  Mmc1_0300  two component, sigma54 specific, Fis family transcriptional regulator  100 
 
 
457 aa  929    Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_3302  two component, sigma54 specific, transcriptional regulator, Fis family  42.64 
 
 
469 aa  343  4e-93  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.498619  n/a   
 
 
-
 
NC_011138  MADE_02891  flagellar regulatory protein C  46 
 
 
445 aa  335  7.999999999999999e-91  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1999  two component, sigma54 specific, Fis family transcriptional regulator  46.31 
 
 
481 aa  332  1e-89  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0775  helix-turn-helix, Fis-type  41.97 
 
 
457 aa  330  5.0000000000000004e-89  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.118214 
 
 
-
 
NC_008321  Shewmr4_1280  two component, sigma54 specific, Fis family transcriptional regulator  46.08 
 
 
446 aa  328  1.0000000000000001e-88  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010338  Caul_1016  two component, sigma54 specific, Fis family transcriptional regulator  47.89 
 
 
455 aa  326  4.0000000000000003e-88  Caulobacter sp. K31  Bacteria  normal  0.963955  normal 
 
 
-
 
NC_007484  Noc_2361  two component sigma-54 specific, transcriptional regulator, Fis famliy  47.86 
 
 
449 aa  325  8.000000000000001e-88  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011883  Ddes_2381  two component, sigma54 specific, transcriptional regulator, Fis family  45.73 
 
 
505 aa  325  1e-87  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_1340  two component, sigma54 specific, Fis family transcriptional regulator  45.61 
 
 
446 aa  325  1e-87  Shewanella sp. ANA-3  Bacteria  normal  normal  0.598769 
 
 
-
 
NC_011769  DvMF_3020  two component, sigma54 specific, transcriptional regulator, Fis family  46.06 
 
 
499 aa  324  2e-87  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008228  Patl_3049  two component, sigma54 specific, Fis family transcriptional regulator  43.47 
 
 
447 aa  323  4e-87  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_2827  two component, sigma54 specific, Fis family transcriptional regulator  45.08 
 
 
470 aa  323  5e-87  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0126149 
 
 
-
 
NC_002947  PP_4371  two component, sigma54 specific, transcriptional regulator, Fis family  47.35 
 
 
451 aa  322  6e-87  Pseudomonas putida KT2440  Bacteria  normal  0.109269  normal  0.91149 
 
 
-
 
NC_008322  Shewmr7_1347  two component, sigma54 specific, Fis family transcriptional regulator  45.37 
 
 
446 aa  322  6e-87  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_1616  two component, sigma54 specific, Fis family transcriptional regulator  46.15 
 
 
452 aa  322  9.000000000000001e-87  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_1405  two component Fis family transcriptional regulator  44.78 
 
 
477 aa  322  9.000000000000001e-87  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.0781313  n/a   
 
 
-
 
NC_009512  Pput_1496  two component, sigma54 specific, Fis family transcriptional regulator  46 
 
 
451 aa  321  9.999999999999999e-87  Pseudomonas putida F1  Bacteria  normal  0.190196  normal  0.699272 
 
 
-
 
NC_009438  Sputcn32_2578  two component, sigma54 specific, Fis family transcriptional regulator  45.23 
 
 
446 aa  321  9.999999999999999e-87  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_1931  two component, sigma54 specific, Fis family transcriptional regulator  45.96 
 
 
477 aa  322  9.999999999999999e-87  Desulfovibrio vulgaris DP4  Bacteria  hitchhiker  0.00933111  normal  0.149931 
 
 
-
 
NC_009901  Spea_1359  two component, sigma54 specific, Fis family transcriptional regulator  44.55 
 
 
450 aa  322  9.999999999999999e-87  Shewanella pealeana ATCC 700345  Bacteria  normal  0.594792  n/a   
 
 
-
 
NC_011312  VSAL_I2310  sigma-54 dependent response regulator  43.77 
 
 
478 aa  322  9.999999999999999e-87  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3230  flagellar regulatory protein C  45.84 
 
 
446 aa  321  1.9999999999999998e-86  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010322  PputGB1_3932  two component, sigma54 specific, Fis family transcriptional regulator  45.75 
 
 
451 aa  321  1.9999999999999998e-86  Pseudomonas putida GB-1  Bacteria  normal  0.215439  normal 
 
 
-
 
NC_009719  Plav_2180  two component, sigma54 specific, Fis family transcriptional regulator  46.37 
 
 
455 aa  320  1.9999999999999998e-86  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1364  two component, sigma54 specific, Fis family transcriptional regulator  44.42 
 
 
447 aa  321  1.9999999999999998e-86  Shewanella loihica PV-4  Bacteria  normal  0.885668  normal 
 
 
-
 
NC_004578  PSPTO_1956  sigma-54 dependent transcriptional regulator/response regulator FleR  45.71 
 
 
471 aa  320  3.9999999999999996e-86  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.75595  n/a   
 
 
-
 
NC_007520  Tcr_1444  two component, sigma54 specific, Fis family transcriptional regulator  43.77 
 
 
459 aa  320  5e-86  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_0707  two component, sigma54 specific, Fis family transcriptional regulator  43.86 
 
 
469 aa  318  9e-86  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.112148  normal  0.322603 
 
 
-
 
NC_013456  VEA_002813  flagellar regulatory protein FleQ  44.86 
 
 
469 aa  317  3e-85  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3459  helix-turn-helix, Fis-type  45.19 
 
 
471 aa  317  3e-85  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1180  two component, sigma54 specific, transcriptional regulator, Fis family protein  46.67 
 
 
449 aa  317  3e-85  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3070  two component, sigma54 specific, Fis family transcriptional regulator  43.95 
 
 
447 aa  316  4e-85  Shewanella baltica OS195  Bacteria  normal  normal  0.6792 
 
 
-
 
NC_009052  Sbal_2928  two component, sigma54 specific, Fis family transcriptional regulator  43.95 
 
 
447 aa  316  5e-85  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2938  two component, sigma54 specific, Fis family transcriptional regulator  43.72 
 
 
447 aa  315  9.999999999999999e-85  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_1435  two component, sigma54 specific, transcriptional regulator, Fis family  43.72 
 
 
447 aa  315  9.999999999999999e-85  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_1534  two component, sigma-54 specific, Fis family transcriptional regulator  46.44 
 
 
463 aa  314  1.9999999999999998e-84  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2299  response regulator receiver protein  45.96 
 
 
446 aa  313  2.9999999999999996e-84  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2897  two component, sigma54 specific, transcriptional regulator, Fis family  44.34 
 
 
473 aa  313  2.9999999999999996e-84  Thauera sp. MZ1T  Bacteria  normal  0.189439  n/a   
 
 
-
 
NC_009484  Acry_1472  two component, sigma54 specific, Fis family transcriptional regulator  46.19 
 
 
451 aa  313  3.9999999999999997e-84  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3068  two component, sigma54 specific, Fis family transcriptional regulator  46.15 
 
 
452 aa  313  3.9999999999999997e-84  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_1461  two component, sigma54 specific, transcriptional regulator, Fis family  44.19 
 
 
459 aa  313  3.9999999999999997e-84  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.402822  n/a   
 
 
-
 
NC_008347  Mmar10_0682  two component, sigma54 specific, Fis family transcriptional regulator  49.38 
 
 
456 aa  313  4.999999999999999e-84  Maricaulis maris MCS10  Bacteria  normal  0.105475  normal  0.791887 
 
 
-
 
NC_007643  Rru_A0540  two component, sigma54 specific, Fis family transcriptional regulator  42.44 
 
 
445 aa  312  6.999999999999999e-84  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1322  sigma-54 factor, interaction region  43.53 
 
 
446 aa  312  6.999999999999999e-84  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  43.36 
 
 
463 aa  310  4e-83  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_007925  RPC_0945  two component, sigma54 specific, Fis family transcriptional regulator  46.85 
 
 
459 aa  309  5e-83  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.540348  normal 
 
 
-
 
NC_013457  VEA_001184  putative two-component response regulator  46.81 
 
 
443 aa  309  6.999999999999999e-83  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1500  flagellar regulatory protein C  41.48 
 
 
446 aa  308  1.0000000000000001e-82  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_3696  two component, sigma54 specific, Fis family transcriptional regulator  44.55 
 
 
458 aa  308  1.0000000000000001e-82  Pseudomonas putida W619  Bacteria  normal  0.12736  normal 
 
 
-
 
NC_009783  VIBHAR_03164  hypothetical protein  42.75 
 
 
469 aa  307  3e-82  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007964  Nham_0687  two component, sigma54 specific, Fis family transcriptional regulator  45.14 
 
 
459 aa  307  3e-82  Nitrobacter hamburgensis X14  Bacteria  normal  0.120276  n/a   
 
 
-
 
NC_013440  Hoch_4153  two component, sigma54 specific, transcriptional regulator, Fis family  43.13 
 
 
466 aa  306  4.0000000000000004e-82  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.11717 
 
 
-
 
NC_009943  Dole_2807  two component, sigma54 specific, Fis family transcriptional regulator  41.2 
 
 
466 aa  306  5.0000000000000004e-82  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.75933  n/a   
 
 
-
 
NC_009457  VC0395_A1719  flagellar regulatory protein C  41.1 
 
 
479 aa  306  6e-82  Vibrio cholerae O395  Bacteria  normal  0.0473988  n/a   
 
 
-
 
NC_010571  Oter_0437  two component, sigma54 specific, Fis family transcriptional regulator  41.44 
 
 
490 aa  306  6e-82  Opitutus terrae PB90-1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1872  two component, sigma54 specific, Fis family transcriptional regulator  46.85 
 
 
459 aa  306  6e-82  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5055  two component, sigma54 specific, Fis family transcriptional regulator  44.05 
 
 
453 aa  305  9.000000000000001e-82  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.39623  normal  0.545382 
 
 
-
 
NC_009654  Mmwyl1_3450  two component, sigma54 specific, Fis family transcriptional regulator  40.7 
 
 
448 aa  305  9.000000000000001e-82  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_3661  sigma-54 factor, interaction region  46.17 
 
 
434 aa  305  1.0000000000000001e-81  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1276  two component, sigma54 specific, Fis family transcriptional regulator  46.58 
 
 
459 aa  304  2.0000000000000002e-81  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009784  VIBHAR_04971  acetoacetate metabolism regulatory protein AtoC  46.81 
 
 
444 aa  303  3.0000000000000004e-81  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_2245  two component, sigma54 specific, transcriptional regulator, Fis family  38.61 
 
 
460 aa  303  5.000000000000001e-81  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_2369  acetoacetate metabolism regulatory protein AtoC  42.12 
 
 
461 aa  303  5.000000000000001e-81  Escherichia coli SMS-3-5  Bacteria  normal  0.0790211  normal 
 
 
-
 
NC_010468  EcolC_1430  acetoacetate metabolism regulatory protein AtoC  42.5 
 
 
461 aa  303  6.000000000000001e-81  Escherichia coli ATCC 8739  Bacteria  normal  0.324678  hitchhiker  0.00137179 
 
 
-
 
NC_009253  Dred_2001  two component, sigma54 specific, Fis family transcriptional regulator  42.93 
 
 
454 aa  302  8.000000000000001e-81  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_0595  helix-turn-helix, Fis-type  46.67 
 
 
459 aa  302  9e-81  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal 
 
 
-
 
CP001509  ECD_02147  fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein  42.5 
 
 
461 aa  301  1e-80  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  42.5 
 
 
461 aa  301  1e-80  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_012892  B21_02106  hypothetical protein  42.5 
 
 
461 aa  301  1e-80  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp1726  hypothetical protein  41.24 
 
 
437 aa  301  1e-80  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_4272  two-component response regulator  43.58 
 
 
470 aa  301  1e-80  Pseudomonas aeruginosa PA7  Bacteria  normal  0.299925  n/a   
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  42.5 
 
 
461 aa  301  1e-80  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_006369  lpl1726  hypothetical protein  41.24 
 
 
437 aa  301  2e-80  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_009720  Xaut_1032  two component, sigma54 specific, Fis family transcriptional regulator  42.86 
 
 
461 aa  301  2e-80  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.454426 
 
 
-
 
NC_007958  RPD_3842  two component, sigma54 specific, transcriptional regulator, Fis family  45.92 
 
 
459 aa  300  2e-80  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0615627  normal 
 
 
-
 
NC_010511  M446_5122  two component, sigma54 specific, Fis family transcriptional regulator  43.27 
 
 
454 aa  300  3e-80  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0127558 
 
 
-
 
NC_011901  Tgr7_1972  response regulator receiver protein  44.68 
 
 
455 aa  300  5e-80  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2191  diguanylate cyclase/phosphodiesterase  41.77 
 
 
497 aa  299  6e-80  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_50180  two-component response regulator  43.72 
 
 
473 aa  299  7e-80  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.966541  hitchhiker  0.00555849 
 
 
-
 
NC_007517  Gmet_2563  two component, sigma54 specific, Fis family transcriptional regulator  42.32 
 
 
480 aa  298  1e-79  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00247378 
 
 
-
 
NC_011894  Mnod_6061  two component, sigma54 specific, transcriptional regulator, Fis family  42.48 
 
 
461 aa  298  1e-79  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0079  sigma-54 dependent trancsriptional regulator  43.93 
 
 
433 aa  298  1e-79  Shewanella sediminis HAW-EB3  Bacteria  normal  0.819278  normal 
 
 
-
 
NC_010814  Glov_2158  two component, sigma54 specific, transcriptional regulator, Fis family  43.26 
 
 
453 aa  298  1e-79  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4456  two component, sigma54 specific, transcriptional regulator, Fis family  45.89 
 
 
457 aa  297  2e-79  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.764911  normal 
 
 
-
 
NC_009901  Spea_0085  sigma-54 dependent trancsriptional regulator  46.11 
 
 
435 aa  297  2e-79  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4088  sigma-54 factor interaction domain-containing protein  45.89 
 
 
457 aa  297  2e-79  Methylobacterium extorquens PA1  Bacteria  hitchhiker  0.0065577  normal  0.672706 
 
 
-
 
NC_009483  Gura_0916  two component, sigma-54 specific, Fis family transcriptional regulator  41.7 
 
 
480 aa  298  2e-79  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2713  two component, sigma54 specific, transcriptional regulator, Fis family  41.82 
 
 
454 aa  296  4e-79  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_3478  sigma-54 dependent trancsriptional regulator  45.8 
 
 
436 aa  296  4e-79  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2149  two component, sigma54 specific, transcriptional regulator, Fis family  43.72 
 
 
477 aa  296  5e-79  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_013173  Dbac_2942  two component, sigma54 specific, transcriptional regulator, Fis family  41.79 
 
 
451 aa  296  6e-79  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4569  two component, sigma54 specific, transcriptional regulator, Fis family  46.46 
 
 
456 aa  295  1e-78  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02226  sigma-54 interacting response regulator transcription regulator protein  43.98 
 
 
491 aa  295  1e-78  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_3263  two component, sigma54 specific, Fis family transcriptional regulator  41.25 
 
 
464 aa  295  1e-78  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000000257125 
 
 
-
 
NC_008009  Acid345_1588  two component, sigma54 specific, Fis family transcriptional regulator  42.27 
 
 
458 aa  295  1e-78  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.13799 
 
 
-
 
NC_009052  Sbal_3981  sigma-54 dependent trancsriptional regulator  39.78 
 
 
433 aa  295  1e-78  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU2041  sigma-54 dependent DNA-binding response regulator  42.79 
 
 
455 aa  294  2e-78  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0427  two component, sigma54 specific, Fis family transcriptional regulator  37.53 
 
 
458 aa  294  2e-78  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  42.14 
 
 
448 aa  293  4e-78  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
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