| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sputcn32_3478 |
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| Symbol | |
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| ID | 5080513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella putrefaciens CN-32 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009438 |
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| Strand | - |
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| Start bp | 4041758 |
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| End bp | 4043068 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640500677 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001184987 |
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| Protein GI | 146294563 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGAAGCC TAAGTATACG GATTGAAGGG CTAAATCTAT CGGCGGATCT TATATGCAAA
ATAATGCATG AAAATTTTTG CCTTTGGAAT GATAAAATGG ACTTGCCTTG GCTCACAATC
GTCAATCTTT CTGATTGTAG TCCTAGTGAC GTAAAGGATT ATCTCGCTCG TTTCCCTAGT
CGTAACCAGC TTGCTTTGTT GGCGCCAGAA CAAGGTGAGT TAGCCGCCGC AGCGATGCGT
GCTGGCGTTC AAGACTATTT ATTAATTCCC GTAGAAAGTG AGCAATTGCT CGCGTCTATT
CATCGATTAC GACGGTTAGA GTTACCTGAC TCTAGTTTGG TGGTATCGGC ATCTGTCAGT
CGGCAGTTGT TGATGCTCGC CCATCGCGCA GCAACCACTG AAGCCAGCGT TCTATTACTG
GGCGAAAGTG GTACAGGCAA AGAACCTCTC GCTCGTTATA TTCACCGTCA TTCTTCGCGT
TCACATAAAC CTTTTATTGC GATTAATTGT GCTGCAATTC CAGAAAGTAT CCTTGAGTCC
GTATTGTTTG GGCACGTAAA AGGCGCCTTT ACAGGTGCAA TTTGTGATAA GGCCGGGAAA
TTTGAGCAAG CCAATGGCGG TACGTTATTG CTCGATGAAA TTGGTGAAAT GCCTTTGACG
TTGCAGGCGA AATTACTGCG AGTTTTGCAG GAAAGAGAAG TGGAAAGGCT GGGTGGGCAG
CATGCAATAG CGTTAGATAT CAGGATAATT GCGTCTACTA ATCGTGACTT AAGGCAGGCA
GTAGAGCTCG GCCATTTCAG AGAAGACTTA TTTTATCGTT TAGATGTTTT ACCGTTGAAA
ATTTCTCCTT TAAGAGATCG AAAGGCAGAT ATTTTGCCTC TTGCTGAGCA CTTCTTGGAC
TTATATCACC AGCCAGATAC CACCAGTACT TGTTATTTTA GTGAGCACGC AAAGCAAGCC
CTTGTGTCCT ATGATTGGCC CGGAAACGTA AGGGAATTAG AAAATTGTAT CCAGCGGGCA
TTGGTGATGC GTCGTGGGCT TGCAATACAA GCTGCCGATC TTGGCTTAAA CATTCAGCTA
GAAGTGCAGG CGGTTGAGCA TCCAGAAGTG ACTGATGGAC TTAGGGCTTC AAAGCAGCAG
GCGGAGTTCC AATATATTAT CGACGTACTT AAGCGTTTCA ATGGGCAACG TACCTTAAGT
GCACAGGCGT TAGGGATGAC GACGAGAGCG TTAAGATATC GACTCGTACA AATGCGGGAA
GCAGGGATTG ATATTGAAAT GTTATTAGAA CAAGCGGGCC GCGCTGCTTA G
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| Protein sequence | MRSLSIRIEG LNLSADLICK IMHENFCLWN DKMDLPWLTI VNLSDCSPSD VKDYLARFPS
RNQLALLAPE QGELAAAAMR AGVQDYLLIP VESEQLLASI HRLRRLELPD SSLVVSASVS
RQLLMLAHRA ATTEASVLLL GESGTGKEPL ARYIHRHSSR SHKPFIAINC AAIPESILES
VLFGHVKGAF TGAICDKAGK FEQANGGTLL LDEIGEMPLT LQAKLLRVLQ EREVERLGGQ
HAIALDIRII ASTNRDLRQA VELGHFREDL FYRLDVLPLK ISPLRDRKAD ILPLAEHFLD
LYHQPDTTST CYFSEHAKQA LVSYDWPGNV RELENCIQRA LVMRRGLAIQ AADLGLNIQL
EVQAVEHPEV TDGLRASKQQ AEFQYIIDVL KRFNGQRTLS AQALGMTTRA LRYRLVQMRE
AGIDIEMLLE QAGRAA
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