| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_1364 |
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| Symbol | |
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| ID | 4921039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 1573108 |
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| End bp | 1574451 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640162905 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001093492 |
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| Protein GI | 127512295 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.885668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAAG CCAAGATATT ACTCGTTGAA GATGATGCGG CGCTGCGCGA AGCCTTAGTC
GATACCTTGC TGCTGGCGCA GTATGAATGT GTCGATGTTG AATCGGCCGA GGCGGCCATC
GTCGCGCTCA AGGGTCAGGA ATTCGACATG GTGATCAGCG ACGTGCAGAT GGAGGGGATA
GGCGGTCTCG GGCTGGTGAA CTATCTTCAG CAGCATAACG CCCAGGTGCC CATCTTATTG
ATGACGGCTT TTGCCACCAT AGACAGTGCG GTAAGTGCCA TTAAGCTCGG CGCGGTGGAC
TATCTGGCGA AACCCTTCGC CCCTGAGGTC TTGCTTAACC AGGTGTCTCG TTATCTCAAA
CCTAAGCTAA TCGAAGATCA ACCCGTGGTG GCCGACGAGC GCAGCCTGGC GCTCTTGGCG
CTGGCACAGA AGGTGGCCCA ATCCGATGCC TCCGTGATGA TCATGGGGCC GAGTGGTTCG
GGTAAAGAGG TGCTTGCCCG CTATATTCAT CAACACAGCC AGCGTGCCAA CGAGCCATTT
GTGGCAATCA ACTGTGCGGC AATTCCTGAA AACATGCTCG AAGCCACACT GTTTGGCTAC
GAGAAGGGGG CCTTCACCGG GGCCTATCAG GCCTGTCCCG GTAAGTTTGA ACAGGCTCAG
GGCGGCACCT TGCTGCTCGA TGAAATCTCC GAGATGGATC TGGGGCTGCA AGCCAAGCTG
CTCAGGGTAT TGCAAGAGCG CGAAGTCGAG CGACTCGGCG GTCGTAAGAC GATTAAGCTC
GATGTGCGTG TGCTGGCCAC CTCTAACCGT GACCTTAAGG CGATGGCGAC CAAAGGCGAT
TTTAGGGAAG ATCTCTATTA CCGCATCAAT GTGTTCCCGC TGACCTGGCC GGCACTGCAT
CAACGCCCGG CGGATATCTT GCCGCTGGCG AGGCACCTGG TGTTGCGTCA TGCCAAGGCT
GCCGGTTTAG CCGTGGCGCC AAGCCTGGAC GATCAGGCGA GCAGGCGTCT ATTGGGCCAC
AGATGGCCGG GGAACGTTCG AGAGCTGGAT AACGTGGTTC AGCGCGCCCT AATTCTACAG
ACAGGTGACA CTATCTGCGC CAAGGATATC GTTATCGATA CTCAGGATGT GATGCTGGAG
CCTGCTTTTG ATAGTGAAAA AACTGTCGAG CCCGAGGGGC TGGGGGATGA GCTTAAGGCA
CAGGAGCATG TGATCATCCT AGAGACCCTC AATCAGTGTA ATGGCAGTCG CAAGCAGGTG
GCCGAAAAGC TGGGTATCAG CGCCCGGACC CTGAGATATA AGATGGCGCG TATGCGTGAC
ATGGGTATTC AGATCCCTGC CTGA
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| Protein sequence | MAEAKILLVE DDAALREALV DTLLLAQYEC VDVESAEAAI VALKGQEFDM VISDVQMEGI
GGLGLVNYLQ QHNAQVPILL MTAFATIDSA VSAIKLGAVD YLAKPFAPEV LLNQVSRYLK
PKLIEDQPVV ADERSLALLA LAQKVAQSDA SVMIMGPSGS GKEVLARYIH QHSQRANEPF
VAINCAAIPE NMLEATLFGY EKGAFTGAYQ ACPGKFEQAQ GGTLLLDEIS EMDLGLQAKL
LRVLQEREVE RLGGRKTIKL DVRVLATSNR DLKAMATKGD FREDLYYRIN VFPLTWPALH
QRPADILPLA RHLVLRHAKA AGLAVAPSLD DQASRRLLGH RWPGNVRELD NVVQRALILQ
TGDTICAKDI VIDTQDVMLE PAFDSEKTVE PEGLGDELKA QEHVIILETL NQCNGSRKQV
AEKLGISART LRYKMARMRD MGIQIPA
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