| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_1359 |
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| Symbol | |
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| ID | 5661758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 1655947 |
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| End bp | 1657299 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235923 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001501221 |
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| Protein GI | 157961187 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.594792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAG GTAAGTTATT ACTTGTAGAA GATGATGCTT CACTGCGTGA AGCACTGCTC
GATACCTTGA TGTTAGCGCA TTATGATTGT GTCGATGTCG CTTCGGCAGA AGAAGCTATC
CTTTCTCTAA AAGCCAACAG ATACGATATG GTGATAAGCG ACGTGCAAAT GGAGGGCGTA
GGAGGCATAG GCCTGCTCAA CTATATGCAG CAACATCACC CGAAAATTCC AGTATTGTTG
ATGACCGCAT ATGCGACCAT AGATAACGCG GTAAATGCGA TGAAACTTGG CGCGGTCGAT
TATTTGGCTA AGCCGTTTTC GTCAGAGGTT CTACTCAATC AAGTCTCTCG TTATTTGCCA
GCTAAAGTGG TTGAAGGCAC GCCAATCGTT GCTGATGAAA AGAGTATTGC ACTGTTAGCA
TTGGCGCAGC GGGTGGCTGC ATCCGATGCC TCTGTGATGA TTATGGGGCC GAGCGGCAGC
GGTAAAGAGG TATTAGCGCG TTATATTCAT CAGAACAGCC AACGCGTCGA CCAGCCGTTT
GTCGCCATTA ACTGCGCGGC AATTCCTGAA AACATGCTTG AGGCGACACT GTTTGGCTAT
GAGAAGGGCG CCTTTACCGG GGCTTATCAA GCCTGTCCTG GCAAGTTTGA ACAGGCGCAA
GGTGGTACTT TGCTGCTTGA TGAAATATCT GAGATGGAAG TCGGCTTGCA AGCAAAATTG
TTGCGGGTAT TGCAAGAGCG TGAAGTGGAG CGTTTAGGCG GCCGTAAAAC GATTAAGCTT
AATGTGCGGG TGCTGGCCAC CTCGAATCGC GACCTAAAAG CGATGGCATC ATCGGGAGAA
TTTAGGGAAG ACTTGTACTA CCGAATTAAC GTCTTCCCGC TGACTTGGCC GTCATTAAAC
CAACGCCCTG CGGATATCTT GCCACTAGCA AGGCACTTGC TGCAGCGCCA TGCCTTAATT
GCCAACCGTA GTGAAATCCC TGAGTTCAGT GAGTGCGCGA CTCGCCGTTT ATTGACTCAT
CGCTGGCCTG GCAATGTACG CGAACTCGAT AATGTGGTGC AAAGAGCACT TATCTTGTCA
GTATCAGCTG AAGTGACTGC GGCAGATATT ATAATCGACT CACAAGAGTT AGGTTTTACC
GCCGAGGTAA TACCTATGGT TGAGAGTAAA CCTGCCGAGC TCGATGGTTT AGGTGACGAA
TTAAAGGCGC AAGAGCATGT GATTATTTTA GAAACCTTAA CTCAATGTGA CGGTAGTCGT
AAGCTTGTCG CCGAGAAGTT AGGGATCAGT GCCAGAACTC TGCGTTACAA GATGGCTAAA
ATGCGTGAAT TAGGCATACA AATACCGGCT TAG
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| Protein sequence | MSEGKLLLVE DDASLREALL DTLMLAHYDC VDVASAEEAI LSLKANRYDM VISDVQMEGV
GGIGLLNYMQ QHHPKIPVLL MTAYATIDNA VNAMKLGAVD YLAKPFSSEV LLNQVSRYLP
AKVVEGTPIV ADEKSIALLA LAQRVAASDA SVMIMGPSGS GKEVLARYIH QNSQRVDQPF
VAINCAAIPE NMLEATLFGY EKGAFTGAYQ ACPGKFEQAQ GGTLLLDEIS EMEVGLQAKL
LRVLQEREVE RLGGRKTIKL NVRVLATSNR DLKAMASSGE FREDLYYRIN VFPLTWPSLN
QRPADILPLA RHLLQRHALI ANRSEIPEFS ECATRRLLTH RWPGNVRELD NVVQRALILS
VSAEVTAADI IIDSQELGFT AEVIPMVESK PAELDGLGDE LKAQEHVIIL ETLTQCDGSR
KLVAEKLGIS ARTLRYKMAK MRELGIQIPA
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