Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_3696 |
Symbol | |
ID | 6112655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 4110127 |
End bp | 4111503 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641623482 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001750547 |
Protein GI | 170722859 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.12736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCATCA AGGTGCTGCT GGTCGAGGAT GACCGTGCGT TGCGCCAAGC GCTTGGCGAT ACCCTTGAGA TCGGCGGTTT TGCCTATCGT GCTGTCGGCA GCGCGGAAGA AGCGCTGGAG GCGGTGCAAC GCGACGCCTA TAGCCTGGTA ATCAGTGACG TGAACATGCC GGGGATGGAT GGGCATCAGT TGCTGGCGCA CTTGCGCCGC CAGCACCCGC AACTGCCGGT GCTGCTGATG ACCGCTCACG CTGCGGTGGA GCGCGCTGTC GAGGCGATGC GCCAGGGTGC TGTGGATTAC CTGGTCAAAC CCTTCGAGCC CAAGGCGCTG CTGAGCCTGG TCGAGCGCCA TGCCGCCGGG CGCCTGAGTG CGGCTGAGGA CGACGGGCCG GTGGCCTGCG AACCTGCCAG CCGCCAATTG CTGGAGCTTG CTGCACGTGT GGCCCGCAGC GATTCGACCG TACTCATCTC CGGTGAGTCG GGCACCGGCA AGGAAGTGCT TGCGCGGTAC ATCCACCAGC AGTCGCCGCG TGCAGCACAG CCATTTGTTG CGATCAACTG CGCGGCCATA CCGGACAACA TGCTCGAGGC GACTTTGTTC GGTCACGAGA AAGGAGCCTT CACCGGCGCC ATTGCGGCGC AGGCCGGCAA ATTCGAGCAG GCCGAGGGTG GCACCTTGCT GCTCGACGAG ATTTCCGAAA TGCCTCTGGG CCTGCAGGCC AAGCTGTTGC GTGTCTTGCA GGAGCGTGAG GTGGAGCGGG TAGGGGGGCG CAAGCCGATT GCCCTGGACA TTCGTGTGCT GGCAACCAGC AATCGCGACA TGGCAGGTGA AGTGGCGGCC GGGCGGTTCC GCGAAGACCT GTTCTATCGC CTGTCGGTGT TCCCGTTGGC CTGGCAGCCG CTGCGTGAGC GTGCCGGTGA CATCCTGCCG CTGGCCGAAC GCTTGCTGGC GCGGCATGTG GCGAAGATGA AGCATGCGCC CGTGCGTCTG TCGGCTGCGG CGCAGGCCTG CCTGCAGGCT CATGGCTGGC CAGGCAATGT GCGCGAACTG GACAACGCCT TGCAGCGGGC GCTGATCCTG CAGCAGGGCG GGGTGATCGA GGCGGCGGAT TTTTGTCTGG CCGGCGCCAT TCCCTTGTCG GCGGTTGCAC CGGTCACAGC GTTGCCTGTG GCGGTCGAGC CGGCAGGGGA GGTCGGTGGC CTGGGCGATG ACATGCGCCG CCATGAGTTC CAGATGATCA TCGACACCTT GCGCGCCGAG CGCGGTCGCC GCAAGGAGGC TGCCGAGCGG CTTGGCATCA GCCCGCGCAC CCTGCGCTAC AAGCTCGCGC AAATGCGCGA TGCCGGGCTC GACGTGGAAG CCAGCCTTTA CGGGTGA
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Protein sequence | MLIKVLLVED DRALRQALGD TLEIGGFAYR AVGSAEEALE AVQRDAYSLV ISDVNMPGMD GHQLLAHLRR QHPQLPVLLM TAHAAVERAV EAMRQGAVDY LVKPFEPKAL LSLVERHAAG RLSAAEDDGP VACEPASRQL LELAARVARS DSTVLISGES GTGKEVLARY IHQQSPRAAQ PFVAINCAAI PDNMLEATLF GHEKGAFTGA IAAQAGKFEQ AEGGTLLLDE ISEMPLGLQA KLLRVLQERE VERVGGRKPI ALDIRVLATS NRDMAGEVAA GRFREDLFYR LSVFPLAWQP LRERAGDILP LAERLLARHV AKMKHAPVRL SAAAQACLQA HGWPGNVREL DNALQRALIL QQGGVIEAAD FCLAGAIPLS AVAPVTALPV AVEPAGEVGG LGDDMRRHEF QMIIDTLRAE RGRRKEAAER LGISPRTLRY KLAQMRDAGL DVEASLYG
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