Gene PputW619_3696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_3696 
Symbol 
ID6112655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp4110127 
End bp4111503 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content66% 
IMG OID641623482 
Producttwo component, sigma54 specific, Fis family transcriptional regulator 
Protein accessionYP_001750547 
Protein GI170722859 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.12736 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCA AGGTGCTGCT GGTCGAGGAT GACCGTGCGT TGCGCCAAGC GCTTGGCGAT 
ACCCTTGAGA TCGGCGGTTT TGCCTATCGT GCTGTCGGCA GCGCGGAAGA AGCGCTGGAG
GCGGTGCAAC GCGACGCCTA TAGCCTGGTA ATCAGTGACG TGAACATGCC GGGGATGGAT
GGGCATCAGT TGCTGGCGCA CTTGCGCCGC CAGCACCCGC AACTGCCGGT GCTGCTGATG
ACCGCTCACG CTGCGGTGGA GCGCGCTGTC GAGGCGATGC GCCAGGGTGC TGTGGATTAC
CTGGTCAAAC CCTTCGAGCC CAAGGCGCTG CTGAGCCTGG TCGAGCGCCA TGCCGCCGGG
CGCCTGAGTG CGGCTGAGGA CGACGGGCCG GTGGCCTGCG AACCTGCCAG CCGCCAATTG
CTGGAGCTTG CTGCACGTGT GGCCCGCAGC GATTCGACCG TACTCATCTC CGGTGAGTCG
GGCACCGGCA AGGAAGTGCT TGCGCGGTAC ATCCACCAGC AGTCGCCGCG TGCAGCACAG
CCATTTGTTG CGATCAACTG CGCGGCCATA CCGGACAACA TGCTCGAGGC GACTTTGTTC
GGTCACGAGA AAGGAGCCTT CACCGGCGCC ATTGCGGCGC AGGCCGGCAA ATTCGAGCAG
GCCGAGGGTG GCACCTTGCT GCTCGACGAG ATTTCCGAAA TGCCTCTGGG CCTGCAGGCC
AAGCTGTTGC GTGTCTTGCA GGAGCGTGAG GTGGAGCGGG TAGGGGGGCG CAAGCCGATT
GCCCTGGACA TTCGTGTGCT GGCAACCAGC AATCGCGACA TGGCAGGTGA AGTGGCGGCC
GGGCGGTTCC GCGAAGACCT GTTCTATCGC CTGTCGGTGT TCCCGTTGGC CTGGCAGCCG
CTGCGTGAGC GTGCCGGTGA CATCCTGCCG CTGGCCGAAC GCTTGCTGGC GCGGCATGTG
GCGAAGATGA AGCATGCGCC CGTGCGTCTG TCGGCTGCGG CGCAGGCCTG CCTGCAGGCT
CATGGCTGGC CAGGCAATGT GCGCGAACTG GACAACGCCT TGCAGCGGGC GCTGATCCTG
CAGCAGGGCG GGGTGATCGA GGCGGCGGAT TTTTGTCTGG CCGGCGCCAT TCCCTTGTCG
GCGGTTGCAC CGGTCACAGC GTTGCCTGTG GCGGTCGAGC CGGCAGGGGA GGTCGGTGGC
CTGGGCGATG ACATGCGCCG CCATGAGTTC CAGATGATCA TCGACACCTT GCGCGCCGAG
CGCGGTCGCC GCAAGGAGGC TGCCGAGCGG CTTGGCATCA GCCCGCGCAC CCTGCGCTAC
AAGCTCGCGC AAATGCGCGA TGCCGGGCTC GACGTGGAAG CCAGCCTTTA CGGGTGA
 
Protein sequence
MLIKVLLVED DRALRQALGD TLEIGGFAYR AVGSAEEALE AVQRDAYSLV ISDVNMPGMD 
GHQLLAHLRR QHPQLPVLLM TAHAAVERAV EAMRQGAVDY LVKPFEPKAL LSLVERHAAG
RLSAAEDDGP VACEPASRQL LELAARVARS DSTVLISGES GTGKEVLARY IHQQSPRAAQ
PFVAINCAAI PDNMLEATLF GHEKGAFTGA IAAQAGKFEQ AEGGTLLLDE ISEMPLGLQA
KLLRVLQERE VERVGGRKPI ALDIRVLATS NRDMAGEVAA GRFREDLFYR LSVFPLAWQP
LRERAGDILP LAERLLARHV AKMKHAPVRL SAAAQACLQA HGWPGNVREL DNALQRALIL
QQGGVIEAAD FCLAGAIPLS AVAPVTALPV AVEPAGEVGG LGDDMRRHEF QMIIDTLRAE
RGRRKEAAER LGISPRTLRY KLAQMRDAGL DVEASLYG