More than 300 homologs were found in PanDaTox collection
for query gene Daci_4877 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  100 
 
 
614 aa  1207    Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  50.84 
 
 
578 aa  468  9.999999999999999e-131  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  53.26 
 
 
580 aa  462  1e-129  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  58.05 
 
 
583 aa  439  9.999999999999999e-123  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
553 aa  436  1e-121  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3216  methyl-accepting chemotaxis sensory transducer  52.29 
 
 
579 aa  432  1e-120  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  52.52 
 
 
592 aa  434  1e-120  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  47.77 
 
 
554 aa  426  1e-118  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  49.91 
 
 
537 aa  427  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  67.29 
 
 
598 aa  426  1e-118  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_008752  Aave_3880  methyl-accepting chemotaxis sensory transducer  51.25 
 
 
557 aa  426  1e-118  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  49.65 
 
 
596 aa  424  1e-117  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  57.04 
 
 
552 aa  419  9.999999999999999e-116  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  51.44 
 
 
542 aa  418  9.999999999999999e-116  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3610  methyl-accepting chemotaxis sensory transducer  51.66 
 
 
511 aa  417  9.999999999999999e-116  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3937  methyl-accepting chemotaxis sensory transducer  45.23 
 
 
589 aa  416  9.999999999999999e-116  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  49.63 
 
 
584 aa  413  1e-114  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  50.19 
 
 
573 aa  406  1.0000000000000001e-112  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_007908  Rfer_2481  methyl-accepting chemotaxis sensory transducer  46.12 
 
 
579 aa  406  1.0000000000000001e-112  Rhodoferax ferrireducens T118  Bacteria  normal  0.37743  n/a   
 
 
-
 
NC_010002  Daci_4878  methyl-accepting chemotaxis sensory transducer  48.32 
 
 
589 aa  401  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  normal  0.506831  normal 
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  49.08 
 
 
535 aa  401  9.999999999999999e-111  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  64.44 
 
 
527 aa  401  9.999999999999999e-111  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_008782  Ajs_3772  methyl-accepting chemotaxis sensory transducer  45.69 
 
 
586 aa  398  1e-109  Acidovorax sp. JS42  Bacteria  normal  0.167359  normal 
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
650 aa  393  1e-108  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_012912  Dd1591_1453  methyl-accepting chemotaxis sensory transducer  49.04 
 
 
532 aa  392  1e-107  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  46.78 
 
 
572 aa  392  1e-107  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  61.74 
 
 
653 aa  389  1e-106  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  61.74 
 
 
653 aa  389  1e-106  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
513 aa  386  1e-106  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2749  methyl-accepting chemotaxis sensory transducer  71.82 
 
 
578 aa  386  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  0.274613  n/a   
 
 
-
 
NC_007908  Rfer_3137  methyl-accepting chemotaxis sensory transducer  48.45 
 
 
532 aa  387  1e-106  Rhodoferax ferrireducens T118  Bacteria  normal  0.310324  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  45.2 
 
 
569 aa  389  1e-106  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
559 aa  389  1e-106  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  68.29 
 
 
537 aa  388  1e-106  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  70.49 
 
 
471 aa  385  1e-105  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_008782  Ajs_2152  methyl-accepting chemotaxis sensory transducer  51.64 
 
 
589 aa  383  1e-105  Acidovorax sp. JS42  Bacteria  normal  normal  0.0117525 
 
 
-
 
NC_003295  RSc3412  putative methyl-accepting chemotaxis I (serine chemoreceptor) transmembrane protein  70.85 
 
 
515 aa  380  1e-104  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.934147 
 
 
-
 
NC_010002  Daci_0172  methyl-accepting chemotaxis sensory transducer  46.89 
 
 
550 aa  379  1e-104  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  51.59 
 
 
562 aa  376  1e-103  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010681  Bphyt_2259  methyl-accepting chemotaxis sensory transducer  47.58 
 
 
588 aa  376  1e-103  Burkholderia phytofirmans PsJN  Bacteria  normal  0.131825  normal  0.497854 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  51.25 
 
 
559 aa  376  1e-103  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_012856  Rpic12D_1408  methyl-accepting chemotaxis sensory transducer  49.08 
 
 
513 aa  375  1e-102  Ralstonia pickettii 12D  Bacteria  normal  0.0312904  normal  0.0311205 
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  47.32 
 
 
513 aa  372  1e-102  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2241  methyl-accepting chemotaxis sensory transducer  53.59 
 
 
536 aa  372  1e-102  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000611014  hitchhiker  0.00000521325 
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  69.38 
 
 
659 aa  374  1e-102  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007951  Bxe_A2002  methyl-accepting chemotaxis sensory transducer  50.48 
 
 
601 aa  369  1e-101  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  44 
 
 
543 aa  367  1e-100  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_010627  Bphy_7569  methyl-accepting chemotaxis sensory transducer  45.33 
 
 
576 aa  366  1e-100  Burkholderia phymatum STM815  Bacteria  normal  0.448898  normal  0.153923 
 
 
-
 
NC_007952  Bxe_B2682  methyl-accepting chemotaxis sensory transducer  57.18 
 
 
580 aa  366  1e-100  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0940  methyl-accepting chemotaxis sensory transducer  48.08 
 
 
546 aa  367  1e-100  Acidovorax citrulli AAC00-1  Bacteria  unclonable  0.000000958657  normal  0.647876 
 
 
-
 
NC_008752  Aave_1960  methyl-accepting chemotaxis sensory transducer  69.26 
 
 
642 aa  368  1e-100  Acidovorax citrulli AAC00-1  Bacteria  normal  0.741418  normal  0.0148687 
 
 
-
 
NC_010625  Bphy_6699  methyl-accepting chemotaxis sensory transducer  44.07 
 
 
575 aa  367  1e-100  Burkholderia phymatum STM815  Bacteria  normal  0.198234  normal 
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  45.13 
 
 
566 aa  365  1e-99  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  45.41 
 
 
595 aa  365  2e-99  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  43.31 
 
 
565 aa  364  2e-99  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_012857  Rpic12D_4162  methyl-accepting chemotaxis sensory transducer  61.58 
 
 
615 aa  365  2e-99  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010678  Rpic_4050  methyl-accepting chemotaxis sensory transducer  61.58 
 
 
615 aa  365  2e-99  Ralstonia pickettii 12J  Bacteria  normal  0.996584  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  54.19 
 
 
581 aa  363  4e-99  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  46.94 
 
 
591 aa  363  4e-99  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_007511  Bcep18194_B1523  methyl-accepting chemotaxis sensory transducer  44.24 
 
 
539 aa  363  6e-99  Burkholderia sp. 383  Bacteria  normal  normal  0.377846 
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  43.66 
 
 
551 aa  362  1e-98  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_0660  chemotaxis sensory transducer  46.33 
 
 
586 aa  362  1e-98  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.756829  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  54.17 
 
 
567 aa  361  2e-98  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_2284  methyl-accepting chemotaxis sensory transducer  45.52 
 
 
547 aa  361  2e-98  Acidovorax citrulli AAC00-1  Bacteria  normal  0.206976  hitchhiker  0.0000952985 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
549 aa  360  6e-98  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  44.7 
 
 
520 aa  359  9e-98  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_010002  Daci_5852  methyl-accepting chemotaxis sensory transducer  45.75 
 
 
618 aa  358  9.999999999999999e-98  Delftia acidovorans SPH-1  Bacteria  normal  0.217953  normal 
 
 
-
 
NC_003296  RSp1406  methyl-accepting chemotaxis I  57.18 
 
 
608 aa  357  2.9999999999999997e-97  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.13211 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  39.97 
 
 
589 aa  357  2.9999999999999997e-97  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007952  Bxe_B0129  methyl-accepting chemotaxis sensory transducer  45.06 
 
 
511 aa  357  2.9999999999999997e-97  Burkholderia xenovorans LB400  Bacteria  normal  0.469561  normal 
 
 
-
 
NC_010676  Bphyt_6336  methyl-accepting chemotaxis sensory transducer  45.09 
 
 
581 aa  357  2.9999999999999997e-97  Burkholderia phytofirmans PsJN  Bacteria  normal  0.794546  normal 
 
 
-
 
NC_010002  Daci_0742  methyl-accepting chemotaxis sensory transducer  47.1 
 
 
581 aa  357  3.9999999999999996e-97  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc1460  methyl-accepting chemotaxis transducer transmembrane protein  48.75 
 
 
513 aa  357  5e-97  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.75608 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  51.61 
 
 
622 aa  356  8.999999999999999e-97  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0620  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
549 aa  355  1e-96  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.0437284 
 
 
-
 
NC_007404  Tbd_1619  chemotaxis sensory transducer  58.9 
 
 
559 aa  355  2e-96  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.940607  normal  0.203143 
 
 
-
 
NC_007947  Mfla_1933  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  57.35 
 
 
598 aa  353  5e-96  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  42.98 
 
 
561 aa  353  5.9999999999999994e-96  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
584 aa  353  5.9999999999999994e-96  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_3444  methyl-accepting chemotaxis sensory transducer  49.23 
 
 
517 aa  352  8e-96  Acidovorax citrulli AAC00-1  Bacteria  normal  0.679068  normal  0.0634638 
 
 
-
 
NC_007650  BTH_II1955  methyl-accepting chemotaxis protein  45.66 
 
 
685 aa  352  8.999999999999999e-96  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0772  methyl-accepting chemotaxis sensory transducer  47.43 
 
 
612 aa  352  1e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.343543  normal  0.663369 
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  46.95 
 
 
620 aa  352  1e-95  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  46.92 
 
 
591 aa  352  1e-95  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_010552  BamMC406_4332  methyl-accepting chemotaxis sensory transducer  43.91 
 
 
545 aa  351  2e-95  Burkholderia ambifaria MC40-6  Bacteria  normal  0.167851  normal 
 
 
-
 
NC_010681  Bphyt_2793  methyl-accepting chemotaxis sensory transducer  59.58 
 
 
573 aa  351  2e-95  Burkholderia phytofirmans PsJN  Bacteria  normal  0.22826  normal  0.238924 
 
 
-
 
NC_008061  Bcen_3926  methyl-accepting chemotaxis sensory transducer  44.98 
 
 
539 aa  351  2e-95  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.279293  n/a   
 
 
-
 
NC_008543  Bcen2424_4440  methyl-accepting chemotaxis sensory transducer  44.98 
 
 
539 aa  351  2e-95  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2019  methyl-accepting chemotaxis sensory transducer  43.8 
 
 
644 aa  350  3e-95  Pectobacterium wasabiae WPP163  Bacteria  normal  0.858801  n/a   
 
 
-
 
NC_010515  Bcenmc03_5865  methyl-accepting chemotaxis sensory transducer  45.65 
 
 
539 aa  351  3e-95  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.439663  normal 
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  45.78 
 
 
653 aa  350  6e-95  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1078  methyl-accepting chemotaxis sensory transducer  59.94 
 
 
587 aa  349  7e-95  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007951  Bxe_A1341  methyl-accepting chemotaxis sensory transducer  58.98 
 
 
558 aa  349  7e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4184  methyl-accepting chemotaxis sensory transducer  52.17 
 
 
493 aa  349  7e-95  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  44.2 
 
 
554 aa  349  8e-95  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_010002  Daci_0740  methyl-accepting chemotaxis sensory transducer  43.95 
 
 
565 aa  349  8e-95  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4001  histidine kinase, HAMP region: chemotaxis sensory transducer  57.3 
 
 
585 aa  349  9e-95  Ralstonia eutropha JMP134  Bacteria  normal  0.0946714  n/a   
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  47.72 
 
 
667 aa  349  9e-95  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0771  methyl-accepting chemotaxis sensory transducer  59.76 
 
 
519 aa  349  9e-95  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_003296  RSp0507  methyl-accepting chemotaxis I  46.91 
 
 
600 aa  349  1e-94  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
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