More than 300 homologs were found in PanDaTox collection
for query gene Bxe_B1684 on replicon NC_007952
Organism: Burkholderia xenovorans LB400



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007952  Bxe_B1684  ABC spermidine/putrescine transporter, inner membrane subunit  100 
 
 
300 aa  593  1e-168  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.396396 
 
 
-
 
NC_010676  Bphyt_4966  binding-protein-dependent transport systems inner membrane component  92.33 
 
 
295 aa  523  1e-147  Burkholderia phytofirmans PsJN  Bacteria  normal  0.102355  normal  0.118273 
 
 
-
 
NC_007509  Bcep18194_C6717  ABC spermidine/putrescine transporter, inner membrane subunit  80.73 
 
 
280 aa  452  1.0000000000000001e-126  Burkholderia sp. 383  Bacteria  decreased coverage  0.00799546  normal 
 
 
-
 
NC_010625  Bphy_6272  binding-protein-dependent transport systems inner membrane component  83.7 
 
 
280 aa  449  1e-125  Burkholderia phymatum STM815  Bacteria  normal  0.596153  normal  0.412675 
 
 
-
 
NC_007492  Pfl01_4467  binding-protein dependent transport system inner membrane protein  66.3 
 
 
282 aa  354  1e-96  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.380773  normal  0.874975 
 
 
-
 
NC_007948  Bpro_2022  binding-protein-dependent transport systems inner membrane component  43.85 
 
 
299 aa  252  4.0000000000000004e-66  Polaromonas sp. JS666  Bacteria  normal  normal  0.612103 
 
 
-
 
NC_009668  Oant_4153  binding-protein-dependent transport systems inner membrane component  35.25 
 
 
263 aa  146  3e-34  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.829399  n/a   
 
 
-
 
NC_013922  Nmag_0084  binding-protein-dependent transport systems inner membrane component  35.69 
 
 
272 aa  139  3.9999999999999997e-32  Natrialba magadii ATCC 43099  Archaea  normal  0.0395984  n/a   
 
 
-
 
NC_009050  Rsph17029_3039  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
264 aa  134  9.999999999999999e-31  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.645477  normal 
 
 
-
 
NC_007494  RSP_3393  ABC opine/polyamine transporter, inner membrane subunit  33.33 
 
 
264 aa  134  9.999999999999999e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.381224  n/a   
 
 
-
 
NC_010511  M446_3856  binding-protein-dependent transport systems inner membrane component  34.2 
 
 
270 aa  134  1.9999999999999998e-30  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0865  binding-protein-dependent transport systems inner membrane component  34.11 
 
 
264 aa  130  2.0000000000000002e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_2579  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
277 aa  129  6e-29  Xanthobacter autotrophicus Py2  Bacteria  normal  0.715101  normal 
 
 
-
 
NC_010184  BcerKBAB4_1203  ornithine carbamoyltransferase  31.58 
 
 
266 aa  128  1.0000000000000001e-28  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1009  ornithine carbamoyltransferase  32.35 
 
 
266 aa  128  1.0000000000000001e-28  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_0859  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
268 aa  127  2.0000000000000002e-28  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_1400  spermidine/putrescine ABC transporter, permease protein  32.64 
 
 
266 aa  127  2.0000000000000002e-28  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1201  spermidine/putrescine ABC transporter permease  32.64 
 
 
266 aa  127  2.0000000000000002e-28  Bacillus anthracis str. Sterne  Bacteria  normal  0.440242  n/a   
 
 
-
 
NC_005957  BT9727_1179  spermidine/putrescine ABC transporter, permease  32.64 
 
 
266 aa  127  2.0000000000000002e-28  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1181  spermidine/putrescine ABC transporter, permease  32.64 
 
 
266 aa  127  2.0000000000000002e-28  Bacillus cereus E33L  Bacteria  normal  0.0752832  n/a   
 
 
-
 
NC_007492  Pfl01_5122  binding-protein dependent transport system inner membrane protein  34.24 
 
 
274 aa  127  2.0000000000000002e-28  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.026759  normal  0.638371 
 
 
-
 
NC_007530  GBAA_1299  spermidine/putrescine ABC transporter permease  32.64 
 
 
266 aa  127  2.0000000000000002e-28  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1377  spermidine/putrescine ABC transporter, permease protein  32.64 
 
 
266 aa  127  2.0000000000000002e-28  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000768374 
 
 
-
 
NC_011369  Rleg2_3161  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
259 aa  127  3e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1923  binding-protein-dependent transport systems inner membrane component  36.54 
 
 
262 aa  126  5e-28  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.438917 
 
 
-
 
NC_008786  Veis_0756  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
264 aa  126  5e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.533361  normal 
 
 
-
 
NC_011725  BCB4264_A1339  spermidine/putrescine ABC transporter, permease protein  32.64 
 
 
266 aa  126  5e-28  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4005  spermidine/putrescine ABC transporter, permease protein  32.64 
 
 
266 aa  126  5e-28  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000000178374 
 
 
-
 
NC_011729  PCC7424_3606  Ornithine carbamoyltransferase  32.74 
 
 
288 aa  125  6e-28  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.129461 
 
 
-
 
NC_013923  Nmag_3864  binding-protein-dependent transport systems inner membrane component  35.34 
 
 
279 aa  125  7e-28  Natrialba magadii ATCC 43099  Archaea  normal  0.623194  n/a   
 
 
-
 
NC_012852  Rleg_6034  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
259 aa  125  1e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.958438 
 
 
-
 
NC_011982  Avi_8149  ABC transporter  33.08 
 
 
266 aa  124  2e-27  Agrobacterium vitis S4  Bacteria  normal  0.828592  n/a   
 
 
-
 
NC_009439  Pmen_4000  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
275 aa  124  2e-27  Pseudomonas mendocina ymp  Bacteria  normal  0.360042  normal 
 
 
-
 
NC_012912  Dd1591_1871  binding-protein-dependent transport systems inner membrane component  35.22 
 
 
278 aa  124  2e-27  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_3799  ornithine carbamoyltransferase  34.63 
 
 
260 aa  124  2e-27  Opitutus terrae PB90-1  Bacteria  normal  normal  0.195582 
 
 
-
 
NC_008786  Veis_4689  binding-protein-dependent transport systems inner membrane component  32.53 
 
 
276 aa  124  2e-27  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.363302  normal 
 
 
-
 
NC_008261  CPF_1479  ABC transporter, permease protein  30.04 
 
 
260 aa  124  2e-27  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0195961  n/a   
 
 
-
 
NC_002947  PP_3816  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
269 aa  123  3e-27  Pseudomonas putida KT2440  Bacteria  decreased coverage  0.0037178  normal  0.4746 
 
 
-
 
NC_007908  Rfer_0887  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
263 aa  123  3e-27  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1221  spermidine/putrescine ABC transporter, permease protein  34.78 
 
 
282 aa  123  4e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_1953  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
268 aa  123  4e-27  Pseudomonas putida F1  Bacteria  normal  0.911704  normal 
 
 
-
 
NC_010552  BamMC406_3539  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
264 aa  123  4e-27  Burkholderia ambifaria MC40-6  Bacteria  normal  0.447694  normal 
 
 
-
 
NC_010501  PputW619_1933  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
269 aa  123  4e-27  Pseudomonas putida W619  Bacteria  normal  normal  0.0161656 
 
 
-
 
NC_010465  YPK_1338  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
282 aa  123  4e-27  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3109  spermidine/putrescine ABC transporter permease  34.78 
 
 
282 aa  123  4e-27  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_5374  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
264 aa  123  4e-27  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.628457 
 
 
-
 
NC_010322  PputGB1_2089  binding-protein-dependent transport systems inner membrane component  33.76 
 
 
268 aa  122  6e-27  Pseudomonas putida GB-1  Bacteria  normal  0.217099  normal 
 
 
-
 
NC_008061  Bcen_4730  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
264 aa  122  6e-27  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.293753  n/a   
 
 
-
 
NC_010086  Bmul_5060  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
264 aa  122  6e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.183233 
 
 
-
 
NC_008543  Bcen2424_3633  binding-protein-dependent transport systems inner membrane component  31.47 
 
 
264 aa  122  6e-27  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.332864 
 
 
-
 
NC_009620  Smed_4607  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
259 aa  122  6e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6540  binding-protein-dependent transport systems inner membrane component  30.52 
 
 
270 aa  122  9e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.199847 
 
 
-
 
NC_010676  Bphyt_6885  binding-protein-dependent transport systems inner membrane component  33.2 
 
 
279 aa  121  9.999999999999999e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.471707  normal  0.190136 
 
 
-
 
NC_011982  Avi_8304  ABC transporter  31.75 
 
 
265 aa  122  9.999999999999999e-27  Agrobacterium vitis S4  Bacteria  normal  0.0178234  n/a   
 
 
-
 
NC_007802  Jann_3236  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
262 aa  121  9.999999999999999e-27  Jannaschia sp. CCS1  Bacteria  normal  0.0387101  normal  0.554966 
 
 
-
 
NC_010625  Bphy_6628  binding-protein-dependent transport systems inner membrane component  31.01 
 
 
264 aa  121  9.999999999999999e-27  Burkholderia phymatum STM815  Bacteria  normal  0.381273  normal 
 
 
-
 
NC_009485  BBta_7195  ABC transporter permease  28.35 
 
 
271 aa  121  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3449  binding-protein-dependent transport systems inner membrane component  32.33 
 
 
269 aa  121  9.999999999999999e-27  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.413551 
 
 
-
 
NC_010676  Bphyt_4429  binding-protein-dependent transport systems inner membrane component  31.69 
 
 
264 aa  121  1.9999999999999998e-26  Burkholderia phytofirmans PsJN  Bacteria  normal  0.186422  normal  0.676109 
 
 
-
 
NC_011989  Avi_2708  ABC transporter membrane spanning protein (polyamine)  29.32 
 
 
264 aa  120  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  0.319241  n/a   
 
 
-
 
NC_013922  Nmag_0103  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
275 aa  120  1.9999999999999998e-26  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012850  Rleg_3985  binding-protein-dependent transport systems inner membrane component  35.2 
 
 
279 aa  120  1.9999999999999998e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0828593 
 
 
-
 
NC_013923  Nmag_3854  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
273 aa  120  1.9999999999999998e-26  Natrialba magadii ATCC 43099  Archaea  normal  0.181021  n/a   
 
 
-
 
NC_002947  PP_0414  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
275 aa  120  3e-26  Pseudomonas putida KT2440  Bacteria  normal  0.958357  normal 
 
 
-
 
NC_004578  PSPTO_2522  ABC transporter, permease protein  31.13 
 
 
264 aa  120  3e-26  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_3736  binding-protein-dependent transport systems inner membrane component  31.76 
 
 
276 aa  120  3e-26  Sinorhizobium medicae WSM419  Bacteria  normal  0.282406  normal 
 
 
-
 
NC_013421  Pecwa_2541  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
272 aa  120  3e-26  Pectobacterium wasabiae WPP163  Bacteria  normal  0.180027  n/a   
 
 
-
 
NC_010623  Bphy_4324  binding-protein-dependent transport systems inner membrane component  32.81 
 
 
279 aa  120  3e-26  Burkholderia phymatum STM815  Bacteria  normal  normal  0.644272 
 
 
-
 
NC_007952  Bxe_B2930  spermidine/putrescine ABC transporter inner membrane protein  32.81 
 
 
279 aa  120  3e-26  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2228  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
272 aa  120  3e-26  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0748  polyamine/opine/phosphonate ABC transporter inner membrane protein  31.28 
 
 
264 aa  120  3.9999999999999996e-26  Burkholderia xenovorans LB400  Bacteria  normal  0.467059  normal 
 
 
-
 
NC_012791  Vapar_0306  binding-protein-dependent transport systems inner membrane component  30.92 
 
 
264 aa  120  3.9999999999999996e-26  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_0448  binding-protein-dependent transport systems inner membrane component  34.78 
 
 
275 aa  119  4.9999999999999996e-26  Pseudomonas putida F1  Bacteria  normal  normal  0.439073 
 
 
-
 
NC_007005  Psyr_2333  binding-protein dependent transport system inner membrane protein  31.13 
 
 
264 aa  119  6e-26  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.161709  normal  0.782854 
 
 
-
 
NC_010322  PputGB1_0445  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
275 aa  119  7e-26  Pseudomonas putida GB-1  Bacteria  normal  normal  0.355956 
 
 
-
 
NC_007948  Bpro_4417  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
268 aa  118  9.999999999999999e-26  Polaromonas sp. JS666  Bacteria  normal  0.303148  normal 
 
 
-
 
NC_008786  Veis_0786  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
265 aa  117  1.9999999999999998e-25  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0283  polyamine ABC-transporter, inner membrane subunit  31.91 
 
 
274 aa  117  1.9999999999999998e-25  Thermobifida fusca YX  Bacteria  normal  0.463421  n/a   
 
 
-
 
NC_007492  Pfl01_3243  binding-protein dependent transport system inner membrane protein  33.94 
 
 
269 aa  117  1.9999999999999998e-25  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.796458 
 
 
-
 
NC_010338  Caul_3949  ornithine carbamoyltransferase  33.82 
 
 
287 aa  117  1.9999999999999998e-25  Caulobacter sp. K31  Bacteria  normal  0.551991  normal 
 
 
-
 
NC_010501  PputW619_4788  binding-protein-dependent transport systems inner membrane component  34.18 
 
 
275 aa  117  1.9999999999999998e-25  Pseudomonas putida W619  Bacteria  normal  normal  0.776443 
 
 
-
 
NC_010505  Mrad2831_3230  binding-protein-dependent transport systems inner membrane component  34 
 
 
272 aa  117  3e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3073  binding-protein-dependent transport systems inner membrane component  32.22 
 
 
284 aa  117  3e-25  Jannaschia sp. CCS1  Bacteria  normal  0.446798  normal  0.0908777 
 
 
-
 
NC_007948  Bpro_4377  binding-protein-dependent transport systems inner membrane component  30.65 
 
 
265 aa  117  3e-25  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A1441  spermidine/putrescine ABC transporter, permease protein  32.64 
 
 
266 aa  117  3e-25  Bacillus cereus AH187  Bacteria  normal  0.0782345  n/a   
 
 
-
 
NC_009621  Smed_5471  binding-protein-dependent transport systems inner membrane component  32.23 
 
 
588 aa  116  3.9999999999999997e-25  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2915  binding-protein-dependent transport systems inner membrane component  30.2 
 
 
267 aa  116  3.9999999999999997e-25  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012853  Rleg_5506  binding-protein-dependent transport systems inner membrane component  32.82 
 
 
267 aa  116  3.9999999999999997e-25  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.673957  normal  0.0589597 
 
 
-
 
NC_009656  PSPA7_0750  ABC transporter permease  33.63 
 
 
276 aa  116  5e-25  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_3945  binding-protein-dependent transport systems inner membrane component  29.96 
 
 
264 aa  116  5e-25  Polaromonas sp. JS666  Bacteria  normal  0.334886  normal  0.870267 
 
 
-
 
NC_013510  Tcur_3393  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
282 aa  116  5e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008688  Pden_4875  binding-protein-dependent transport systems inner membrane component  33.6 
 
 
587 aa  116  6e-25  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.432532 
 
 
-
 
NC_007952  Bxe_B2705  spermidine/putrescine ABC transporter inner membrane protein  30.45 
 
 
265 aa  116  6e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.628706  normal 
 
 
-
 
NC_009049  Rsph17029_0830  binding-protein-dependent transport systems inner membrane component  30.6 
 
 
265 aa  115  6e-25  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.225733  normal 
 
 
-
 
NC_011981  Avi_7601  ABC transporter membrane spanning protein  30.58 
 
 
273 aa  115  6.9999999999999995e-25  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_1894  binding-protein-dependent transport systems inner membrane component  30.04 
 
 
265 aa  115  8.999999999999998e-25  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.00977235  normal  0.387076 
 
 
-
 
NC_007493  RSP_2156  ABC transporter, inner membrane subunit  30.6 
 
 
265 aa  115  8.999999999999998e-25  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2665  spermidine/putrescine ABC transporter, permease protein, putative  31.84 
 
 
271 aa  115  1.0000000000000001e-24  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0357719  n/a   
 
 
-
 
NC_008543  Bcen2424_3921  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
281 aa  114  1.0000000000000001e-24  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1834  ABC transporter, permease protein  32.81 
 
 
269 aa  115  1.0000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.632575 
 
 
-
 
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