Gene BCG9842_B4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBCG9842_B4005 
SymbolpotC 
ID7183348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cereus G9842 
KingdomBacteria 
Replicon accessionNC_011772 
Strand
Start bp1241254 
End bp1242054 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content34% 
IMG OID643549060 
Productspermidine/putrescine ABC transporter, permease protein 
Protein accessionYP_002444730 
Protein GI218896319 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.000000178374 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGAAGT TTTTAGTTTC TTATTCTTGG TTAATTTTGT TATTCTTGTA TTTTCCAATG 
ATGGTTTTAA TGGTCTATTC TTTCAACGAC TCTCGCATTA ATGCGGAGTG GGAAGGTTTT
ACATTCCATT GGTATACAGA TTTATTTCAA AAACAAGATG TTATTGATGC ATTTGTAAAT
AGTATTACGA TTGCAGTTAT AACAACGATT GTGACAACGG TACTTGGCGT ATTCTTTGCG
ATTGCTTTAC ATCGTTATAA ATATCGTTTC GAAGGGGCTA TTAATGGCCT TGTATATTTA
CCAATTTTAA TTCCTGATAT TTTAATGGGA TTATCTTTAC TAATTCTTTT CAGTCAGTTA
GGAATGGAAC TTGGACAAAC AACGATTATT ATTGCACATA TTACATTTAG TATTTCGTTT
GTTGTTGTTA TTTTAGCTGC GCGTCTTTCA AGTATGGGAC GTGACTTAGA AGAAGCTGCA
AATGATTTAG GAGCAACGCC TTGGCAAACG TTTCGTTATG TAACGTTCCC AGCAATTGCA
CCGGGAGTTA TTTCGGCAGC ATTATTAACA TTCACATTAT CAATTGATGA TTTTGTAATT
AGTTTCTTCG TATCAGGACC AGGATCAACA ACATTGCCAT TATACATTTA CAGTATGGTT
AAGCGCGGAG TATCACCAGA AATTAATGCT CTTTCTACAA TTTTAATTGT TGCTATCGTA
GGATTAATGG TTCTATCTGA AATCTTCCGT AACAAAGGTG CAGATGGTGA AGAAAACTCT
GGAGGACACC TTCCTTTATA A
 
Protein sequence
MKKFLVSYSW LILLFLYFPM MVLMVYSFND SRINAEWEGF TFHWYTDLFQ KQDVIDAFVN 
SITIAVITTI VTTVLGVFFA IALHRYKYRF EGAINGLVYL PILIPDILMG LSLLILFSQL
GMELGQTTII IAHITFSISF VVVILAARLS SMGRDLEEAA NDLGATPWQT FRYVTFPAIA
PGVISAALLT FTLSIDDFVI SFFVSGPGST TLPLYIYSMV KRGVSPEINA LSTILIVAIV
GLMVLSEIFR NKGADGEENS GGHLPL