Gene Caul_3949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3949 
Symbol 
ID5901411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4275809 
End bp4276672 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content67% 
IMG OID641564470 
Productornithine carbamoyltransferase 
Protein accessionYP_001685572 
Protein GI167647909 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.551991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAATGA CCCGCAAATC CCCGCCCGGC CCCCTCGAAT ACCTCCGCCG CTGGCAGATG 
CAGGCCTGGC TGGCGGCCGT GGGGATCTTC CTCTACGCGC CGCTGATCGC CCTGATGGCC
TTCAGCTTCA ACGACAGCCG GCGCAACATC GTCTGGAAGG GCTTCACGCT CAAATATTAC
GACAAGGCCT TCCACGACTC GTCGCTGATC GAGGCCTTCG CCAATTCCCT GACCATCGCC
GCCCTGTGCA CCGTGCTCAG CGTCATCCTG GGCGCCATGG TCGCCCTGGT GCTGTGGCGC
TTCCGCTTTC CCGGCAAGAC GGTGCTGGAC GGCGCTCTGG CCCTGCCGAT CGTGGTGCCC
GAGATCTGCA TGGGCGTGGC CATGCTGGTG TTCTTCGCCA AGGTCCTGCC CTGGCCCGTC
GGCCTGCCCT GGCCGCTGAA CCTGGGGGCG ATCACCATCG CCCACGTGTC GTTCTCGTTC
CCGTTCGTGG CGGTGGTGGT CCGCGCCCGG ATGGCCAGCT TCAACCGCGA GATGGAGGAG
GCGGCCCGCG ATCTCGGGGC CGGCGAATGG CGCACGATCT GGGACGTGAT CCTGCCGCAC
ATGGCCCCGT CGCTGGTGGC CGGCGCGCTG CTGGCCTTCA CGCTGAGCCT GGACGACTTC
GTCATCACCT TCTTCACCGC CGGGCCGGAC ACCGTGACCT TCCCGGTGAA GGTCTATTCG
ATGGTGCGGT TCTCGGTGAC GCCCGAGGTC AACGCGGCCT CGACCATCCT GATCGTGCTG
ACGGTGATCC TGACGGCGGT GGCGCTGAAG CTGCAGGGCG ATCCCGCGGG CGTGGCGGGC
GGTCATGGGG GGGAGAAGGC ATGA
 
Protein sequence
MPMTRKSPPG PLEYLRRWQM QAWLAAVGIF LYAPLIALMA FSFNDSRRNI VWKGFTLKYY 
DKAFHDSSLI EAFANSLTIA ALCTVLSVIL GAMVALVLWR FRFPGKTVLD GALALPIVVP
EICMGVAMLV FFAKVLPWPV GLPWPLNLGA ITIAHVSFSF PFVAVVVRAR MASFNREMEE
AARDLGAGEW RTIWDVILPH MAPSLVAGAL LAFTLSLDDF VITFFTAGPD TVTFPVKVYS
MVRFSVTPEV NAASTILIVL TVILTAVALK LQGDPAGVAG GHGGEKA