| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0283 |
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| Symbol | |
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| ID | 3578880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | + |
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| Start bp | 316205 |
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| End bp | 317029 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637683967 |
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| Product | polyamine ABC-transporter, inner membrane subunit |
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| Protein accession | YP_288344 |
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| Protein GI | 72160687 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.463421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA CAGCCACCAA GGCCGAAGCA ACCGTGTCCC GTCGCCAGCG GCGGCCCAGG
ATCACACTGG GCAAAGTGTT CACCTGGGCC GTCCTGGTCT GGCTGTTCCT GCCCATCGCG
GGCATGATCG CCTTCAGCTT CAACGACATC AGCGGACGCC ACAACGTCAC CTGGCAGGGC
TTCACGCTCA AGTGGTACGG CAAGGCGTTC GTCTACCCGG ACCTCAACCA GGCGCTGTTC
AACACCCTGC TCATCGGGTT CGCCACCATG CTCATCGCCG GAATCACCGG CACCCTGCTC
GGCTTGGCGA TGGGCCGCTA CCGGTTCCGC GGGCAGCAGG CCAGCAACCT GGTGATGTTC
GCCGCGATCT CCGCACCCGA AGTCGTCATC GGCGCGTCAC TGCTGTCGCT GTTCATCGCC
CTCAACCTGA CCCTGGGCAT GACCACCGTG ATCATCGCGC ACGTCATGTT CAGCATCTCG
TTCGTGGCGA TCACCGTGCG GGCCCGGGTC ATGACCATGG ACCCCAGCAT TGAGGAAGCC
GCGCGCGACC TCGGCGCGGA CAGTTGGACC ACGTTCCGGC TGGTGACCTT CCCCATGCTG
TTCCCCGCAA TCATGGCGGG CGGCCTGCTG GCGTTCGCGC TGTCAGTGGA CGACTTCATC
ATCACCAGCT TCGTCAGCGG CGACCTCACC ACCTTCCCGC TGTGGATCTG GGGTTCCACC
CGTGTCGGCA TCCCCCCGCA GGTCAACGTG ATGGGCACGC TGATCTTCGT GGTGGGTGTG
CTGCTCGCCA TCACCAACAT CATCCTCGCC CGGCGGCGCT CCTGA
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| Protein sequence | MSATATKAEA TVSRRQRRPR ITLGKVFTWA VLVWLFLPIA GMIAFSFNDI SGRHNVTWQG
FTLKWYGKAF VYPDLNQALF NTLLIGFATM LIAGITGTLL GLAMGRYRFR GQQASNLVMF
AAISAPEVVI GASLLSLFIA LNLTLGMTTV IIAHVMFSIS FVAITVRARV MTMDPSIEEA
ARDLGADSWT TFRLVTFPML FPAIMAGGLL AFALSVDDFI ITSFVSGDLT TFPLWIWGST
RVGIPPQVNV MGTLIFVVGV LLAITNIILA RRRS
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