Gene Bphy_4324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4324 
Symbol 
ID6245847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1343466 
End bp1344305 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content59% 
IMG OID642596079 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001860486 
Protein GI186473144 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.644272 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGG CCAAACCGAT GTTCGCGCCG CACACGTCGA CGATCGAACG CATCTGGTAC 
TTCACGCTGC GCGGGCTCGC GGTGTTGACG CTGCTGTATC TGATCCTGCC TGTGCTCGCG
ATCGTGCCGC TGTCGTTCTC GTCGAGCACG TTCCTTGTCT ATCCGATTCC GGGCTGGTCG
CTGCGCTGGT ATCAGAACCT GGTCGCCTCC GACGAATGGC GGATGGCCGC GAAGAACAGC
TTCATCGTCG CGCCGTCGGC GACTGTGCTG GCCACCGTGC TCGGCACGCT CGCGGCGATC
GGGCTGACGA AAGCAAACTT CAAGGGCAAG GCGCTGCTGA TGGCGATACT GATCTCGCCG
ATGATCGTGC CTGTCGTCGT GGTCGGTGTC GGGATGTATC TGTTTTTTGC GCCGCTCGGG
CTCGCTAATA CGTATATCGG GTTGATCATG GCGCATGCGT CTCTGGGCGT GCCGTTCGTT
GTGACTACCG TTGCCGCGAC TTTGCAAGGC TTCAATTACA ACCTTGTGCG GGCGAGCCTG
TCGCTTGGCG CGAGTCCAGT GAAGACGTTT TTCAGTATCA CGTTGCCTGT GATTGCGCCT
GGCGTGATTT CCGGGGCACT GTTCGCATTT GCGACTTCGT TCGACGAGGT GGTCGTTACG
TTGTTTCTCG CTGGCGCGGA TCAAACGACG CTGCCGCGTC AGATGTTCAC CGGCATTCGC
GAAAACATCA GCCCGACTAT TGCTGCCCTG GCTACGATTC TTATCGTGTT TTCTACTTGT
CTGCTGCTTG CGCTCGAGTG GCTGCGCGGG AGGAATGCTG CTCGGGCTGT GGCCGTTTAG
 
Protein sequence
MKMAKPMFAP HTSTIERIWY FTLRGLAVLT LLYLILPVLA IVPLSFSSST FLVYPIPGWS 
LRWYQNLVAS DEWRMAAKNS FIVAPSATVL ATVLGTLAAI GLTKANFKGK ALLMAILISP
MIVPVVVVGV GMYLFFAPLG LANTYIGLIM AHASLGVPFV VTTVAATLQG FNYNLVRASL
SLGASPVKTF FSITLPVIAP GVISGALFAF ATSFDEVVVT LFLAGADQTT LPRQMFTGIR
ENISPTIAAL ATILIVFSTC LLLALEWLRG RNAARAVAV