Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4324 |
Symbol | |
ID | 6245847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1343466 |
End bp | 1344305 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642596079 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001860486 |
Protein GI | 186473144 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.644272 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGG CCAAACCGAT GTTCGCGCCG CACACGTCGA CGATCGAACG CATCTGGTAC TTCACGCTGC GCGGGCTCGC GGTGTTGACG CTGCTGTATC TGATCCTGCC TGTGCTCGCG ATCGTGCCGC TGTCGTTCTC GTCGAGCACG TTCCTTGTCT ATCCGATTCC GGGCTGGTCG CTGCGCTGGT ATCAGAACCT GGTCGCCTCC GACGAATGGC GGATGGCCGC GAAGAACAGC TTCATCGTCG CGCCGTCGGC GACTGTGCTG GCCACCGTGC TCGGCACGCT CGCGGCGATC GGGCTGACGA AAGCAAACTT CAAGGGCAAG GCGCTGCTGA TGGCGATACT GATCTCGCCG ATGATCGTGC CTGTCGTCGT GGTCGGTGTC GGGATGTATC TGTTTTTTGC GCCGCTCGGG CTCGCTAATA CGTATATCGG GTTGATCATG GCGCATGCGT CTCTGGGCGT GCCGTTCGTT GTGACTACCG TTGCCGCGAC TTTGCAAGGC TTCAATTACA ACCTTGTGCG GGCGAGCCTG TCGCTTGGCG CGAGTCCAGT GAAGACGTTT TTCAGTATCA CGTTGCCTGT GATTGCGCCT GGCGTGATTT CCGGGGCACT GTTCGCATTT GCGACTTCGT TCGACGAGGT GGTCGTTACG TTGTTTCTCG CTGGCGCGGA TCAAACGACG CTGCCGCGTC AGATGTTCAC CGGCATTCGC GAAAACATCA GCCCGACTAT TGCTGCCCTG GCTACGATTC TTATCGTGTT TTCTACTTGT CTGCTGCTTG CGCTCGAGTG GCTGCGCGGG AGGAATGCTG CTCGGGCTGT GGCCGTTTAG
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Protein sequence | MKMAKPMFAP HTSTIERIWY FTLRGLAVLT LLYLILPVLA IVPLSFSSST FLVYPIPGWS LRWYQNLVAS DEWRMAAKNS FIVAPSATVL ATVLGTLAAI GLTKANFKGK ALLMAILISP MIVPVVVVGV GMYLFFAPLG LANTYIGLIM AHASLGVPFV VTTVAATLQG FNYNLVRASL SLGASPVKTF FSITLPVIAP GVISGALFAF ATSFDEVVVT LFLAGADQTT LPRQMFTGIR ENISPTIAAL ATILIVFSTC LLLALEWLRG RNAARAVAV
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