| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7601 |
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| Symbol | |
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| ID | 7380256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 543769 |
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| End bp | 544590 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643641608 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002539905 |
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| Protein GI | 222102866 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAATC ATCGCGAAAA TCCGATCCCG ACCCTTCTCT ACAAGGCATT TGTTTTCGGC
TTCGGCAGTC TCAGCCTGAT CTATCTGGTG GCGCCGATTA TCATTGTGAT CACCATGTCC
TTCACCTCGG GCCAGACGCT CAAATATCCG CCAGAGGGTT TTTCTCTGCG CTGGTATGAG
GCGCTGATCG ATCCCGTCCG CTCAGGAACC GAACACATAG CGGCTGGCAA TTCGCTGAAG
ATCGCCGGCC TCGCGGTGCT CGGATCGCTG CTGTTTGCCG TGCCTGCCAC CATTGGCATG
GCACGGATGC GACGCAGTAC GGTCAATGCG CTGGAGCCGT TTCTGTTGGC CCCGCTCGTC
CTGCCAAGCC TGGTGTATGG TCTGGCGGCG CTGATCGTGG CGAATTTCGT CGGCTTCCAG
CCTTCGCTCT GGCTCACCGT CGTCGGCCAT GTCGTCGTCT TCGGGCCACT GATGTACCGC
GCCGCTTCCG TTGTCGCGCA AGGGATCAAT CCGTCGCTGG CCGAGGCCTC TGCCGTGATG
GGTGCAACCT GGCACACGAC GCTCCGGCGC GTGATCCTGC CGCTGCTGAC ACCAGGCATT
CTGGCCGGCG CCTTCCTCGT CTTCATCCAG TCCCTCGACA ACGTCTCTGT GTCGCTTTTC
CTGGCCGACG CGCAAACGAC CGTGCTGCCG CTTCGCATGT TTGCATTGAT CGAGGAGTCG
CTCGATGTCC GGGTGGCCGC AATGTCAGGA ATCCTGATCG GGCTGACCCT GGTGGTGATG
CTGGTTGCGA GGCGGGTGCT GGCACCATCC CGTCAAGCCT GA
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| Protein sequence | MHNHRENPIP TLLYKAFVFG FGSLSLIYLV APIIIVITMS FTSGQTLKYP PEGFSLRWYE
ALIDPVRSGT EHIAAGNSLK IAGLAVLGSL LFAVPATIGM ARMRRSTVNA LEPFLLAPLV
LPSLVYGLAA LIVANFVGFQ PSLWLTVVGH VVVFGPLMYR AASVVAQGIN PSLAEASAVM
GATWHTTLRR VILPLLTPGI LAGAFLVFIQ SLDNVSVSLF LADAQTTVLP LRMFALIEES
LDVRVAAMSG ILIGLTLVVM LVARRVLAPS RQA
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