More than 300 homologs were found in PanDaTox collection
for query gene Tbis_0453 on replicon NC_014165
Organism: Thermobispora bispora DSM 43833



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  100 
 
 		 251 aa  501  1e-141  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  83.61 
 
 		 237 aa  405  1.0000000000000001e-112  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  83.19 
 
 		 237 aa  395  1e-109  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  80.37 
 
 		 264 aa  349  2e-95  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  76.13 
 
 		 261 aa  348  5e-95  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  68.67 
 
 		 250 aa  340  9e-93  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  70.59 
 
 		 247 aa  338  4e-92  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  67.84 
 
 		 253 aa  337  9.999999999999999e-92  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  72.32 
 
 		 259 aa  331  7.000000000000001e-90  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  72.61 
 
 		 255 aa  331  7.000000000000001e-90  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  65.53 
 
 		 241 aa  310  2e-83  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  67.86 
 
 		 249 aa  308  6.999999999999999e-83  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  63.49 
 
 		 243 aa  304  9.000000000000001e-82  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  64.29 
 
 		 240 aa  300  2e-80  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  59.27 
 
 		 248 aa  299  3e-80  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  64.09 
 
 		 232 aa  295  5e-79  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  63.09 
 
 		 257 aa  292  3e-78  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  63.64 
 
 		 232 aa  291  5e-78  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  66.06 
 
 		 239 aa  291  8e-78  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  66.06 
 
 		 239 aa  288  7e-77  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  64.73 
 
 		 257 aa  285  4e-76  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  64.73 
 
 		 257 aa  285  4e-76  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  64.73 
 
 		 257 aa  285  4e-76  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  64.38 
 
 		 267 aa  284  1.0000000000000001e-75  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  64.44 
 
 		 250 aa  282  3.0000000000000004e-75  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  64.98 
 
 		 278 aa  282  3.0000000000000004e-75  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  60.7 
 
 		 249 aa  282  5.000000000000001e-75  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  65.24 
 
 		 255 aa  280  2e-74  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  60.91 
 
 		 236 aa  275  4e-73  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  63.84 
 
 		 270 aa  271  9e-72  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  65.61 
 
 		 256 aa  269  2.9999999999999997e-71  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  56.6 
 
 		 266 aa  268  5e-71  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  63.47 
 
 		 232 aa  266  2.9999999999999995e-70  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  59.57 
 
 		 243 aa  265  7e-70  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  48.3 
 
 		 296 aa  251  1e-65  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_013169  Ksed_03550  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40 
 
 		 261 aa  150  2e-35  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.329191  normal  1 
 
 
-
 
NC_009565  TBFG_12898  transcriptional regulator  44.5 
 
 		 252 aa  149  3e-35  Mycobacterium tuberculosis F11  Bacteria  normal  0.385025  normal  1 
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  45.5 
 
 		 258 aa  145  7.0000000000000006e-34  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002936  DET1126  transcriptional regulator  51.54 
 
 		 223 aa  133  1.9999999999999998e-30  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  44.59 
 
 		 238 aa  132  3.9999999999999996e-30  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  50.77 
 
 		 223 aa  132  5e-30  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  51.16 
 
 		 217 aa  131  9e-30  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  47.69 
 
 		 223 aa  127  2.0000000000000002e-28  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  41.21 
 
 		 226 aa  126  3e-28  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  42.11 
 
 		 239 aa  125  9e-28  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  39.06 
 
 		 236 aa  119  7e-26  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  35.38 
 
 		 223 aa  117  9.999999999999999e-26  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  37.64 
 
 		 234 aa  117  9.999999999999999e-26  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  35.38 
 
 		 223 aa  117  9.999999999999999e-26  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  35.9 
 
 		 223 aa  118  9.999999999999999e-26  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  38.8 
 
 		 232 aa  117  9.999999999999999e-26  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  35.9 
 
 		 223 aa  117  1.9999999999999998e-25  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_006274  BCZK1193  response regulator  35.9 
 
 		 223 aa  117  1.9999999999999998e-25  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  35.9 
 
 		 223 aa  117  1.9999999999999998e-25  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  35.9 
 
 		 223 aa  117  1.9999999999999998e-25  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  35.9 
 
 		 223 aa  117  1.9999999999999998e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  37.13 
 
 		 239 aa  116  3e-25  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  35.9 
 
 		 223 aa  116  3e-25  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  35.38 
 
 		 223 aa  116  3e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  35.9 
 
 		 223 aa  116  3e-25  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  36.92 
 
 		 239 aa  116  3e-25  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  39.89 
 
 		 224 aa  116  3e-25  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  36.92 
 
 		 239 aa  116  3e-25  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  36.98 
 
 		 229 aa  115  5e-25  Moorella thermoacetica ATCC 39073  Bacteria  normal  1  normal  0.834843 
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  36.84 
 
 		 232 aa  115  5e-25  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  49.21 
 
 		 236 aa  115  6e-25  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  35.87 
 
 		 227 aa  115  7.999999999999999e-25  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  37.89 
 
 		 231 aa  114  1.0000000000000001e-24  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal  1 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  36.59 
 
 		 228 aa  114  1.0000000000000001e-24  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  36.63 
 
 		 230 aa  114  2.0000000000000002e-24  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  37.95 
 
 		 235 aa  113  2.0000000000000002e-24  Lactobacillus reuteri DSM 20016  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  36.31 
 
 		 228 aa  114  2.0000000000000002e-24  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  33.93 
 
 		 239 aa  113  3e-24  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_007413  Ava_1922  two component transcriptional regulator  40.49 
 
 		 228 aa  112  4.0000000000000004e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_0154  two component transcriptional regulator  35.68 
 
 		 238 aa  112  5e-24  Clostridium phytofermentans ISDg  Bacteria  normal  0.644268  n/a   
 
 
-
 
NC_008228  Patl_0218  two component transcriptional regulator  35.29 
 
 		 239 aa  112  6e-24  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  32.47 
 
 		 223 aa  112  6e-24  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  40.11 
 
 		 231 aa  112  6e-24  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  39.02 
 
 		 237 aa  112  8.000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  42.95 
 
 		 224 aa  111  1.0000000000000001e-23  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  38.86 
 
 		 237 aa  110  1.0000000000000001e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  34.85 
 
 		 224 aa  111  1.0000000000000001e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  37.22 
 
 		 237 aa  110  2.0000000000000002e-23  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  0.421984 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  36.9 
 
 		 235 aa  110  2.0000000000000002e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  40.33 
 
 		 233 aa  110  2.0000000000000002e-23  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  33.88 
 
 		 230 aa  110  3e-23  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  34.54 
 
 		 239 aa  110  3e-23  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  36.82 
 
 		 231 aa  110  3e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_0421  two component transcriptional regulator  35.79 
 
 		 245 aa  109  4.0000000000000004e-23  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0518956  normal  1 
 
 
-
 
NC_013093  Amir_3871  two component transcriptional regulator, winged helix family  37.73 
 
 		 227 aa  108  6e-23  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.0000000473157  n/a   
 
 
-
 
NC_007604  Synpcc7942_2305  two component transcriptional regulator  37.23 
 
 		 228 aa  108  7.000000000000001e-23  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.79647 
 
 
-
 
NC_010001  Cphy_3429  two component transcriptional regulator  38.1 
 
 		 233 aa  108  7.000000000000001e-23  Clostridium phytofermentans ISDg  Bacteria  normal  0.0608192  n/a   
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  35.36 
 
 		 225 aa  108  8.000000000000001e-23  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  37.1 
 
 		 228 aa  108  9.000000000000001e-23  Opitutus terrae PB90-1  Bacteria  normal  1  normal  0.0605198 
 
 
-
 
NC_009664  Krad_3815  two component transcriptional regulator, winged helix family  38.12 
 
 		 225 aa  108  9.000000000000001e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0278114  normal  0.0118387 
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  32.5 
 
 		 227 aa  108  1e-22  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal  1 
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  37.78 
 
 		 226 aa  107  1e-22  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  36.46 
 
 		 231 aa  107  1e-22  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  hitchhiker  0.000343135 
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  36.81 
 
 		 231 aa  108  1e-22  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_013216  Dtox_3085  two component transcriptional regulator, winged helix family  37.58 
 
 		 232 aa  107  1e-22  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000315463  hitchhiker  0.000599707 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>