Gene Elen_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagElen_2015 
Symbol 
ID8416326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEggerthella lenta DSM 2243 
KingdomBacteria 
Replicon accessionNC_013204 
Strand
Start bp2362355 
End bp2363029 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content70% 
IMG OID645024992 
Productputative two component transcriptional regulator, winged helix family 
Protein accessionYP_003182368 
Protein GI257791762 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0839248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000000188648 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAGCGCA AGCAGGTGAT ATTCGTCGCG GACAGCCTCG ACAACGCGCA TAAGTTCCAG 
CAGGTGCTGT CGGGTTTGGA CGTGGACGTG GCAGCGGGGT CGTCCGCCCA GTTCAAGAAG
CTGCTCGGGC AGCATCCCGC CTGCGACCTC GTCGTGTACG AGGCGCGCGG CGGCGCGTCG
GAGGACGTGG CCGGCATCGA GGCGCTGCTG CTCGAGGACA ACGCGGCGTC GCTGCTCGTC
ATCGTGGGGG AGGACCAGCT CGTCCGCTTC CGGCTGCCCG TGCAGGTGAA GAGCGACTTC
GTGATGCGCG GCGCATCGCC TGAGGAGTGC GCGGCCCGCA TCCGCCAGCT GCTGTGGCCC
GGCAACGAGG CCGCCACCTC GGACTGCCTC GCCGTGGAGA ACATGACCGT GAACCTGGCC
ACCTACCAGG TGACGGTGGG CGGCGAGCCG CTCGACCTCA CGTACCTCGA GTACGCGCTG
CTGGCCTTCC TCGTCACGCA CCCCTCGCGC ACCTACTCGC GCGACGCGCT GCTGCGCCGG
GTGTGGGGCT TCGACTACTA CGGCGGCTCG CGCACGGTGG ACGTGCACGT GCGGCGCATC
CGGGCGAAGC TGGGCCCCGA GCTCGCCCAG CATCTGGAAA CGGTGCGCGG CGTCGGCTAC
CTGTGGAGCG CGTAG
 
Protein sequence
MQRKQVIFVA DSLDNAHKFQ QVLSGLDVDV AAGSSAQFKK LLGQHPACDL VVYEARGGAS 
EDVAGIEALL LEDNAASLLV IVGEDQLVRF RLPVQVKSDF VMRGASPEEC AARIRQLLWP
GNEAATSDCL AVENMTVNLA TYQVTVGGEP LDLTYLEYAL LAFLVTHPSR TYSRDALLRR
VWGFDYYGGS RTVDVHVRRI RAKLGPELAQ HLETVRGVGY LWSA