More than 300 homologs were found in PanDaTox collection
for query gene DET1126 on replicon NC_002936
Organism: Dehalococcoides ethenogenes 195



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_002936  DET1126  transcriptional regulator  100 
 
 
223 aa  449  1e-125  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  88.79 
 
 
223 aa  408  1e-113  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  87.89 
 
 
223 aa  406  1.0000000000000001e-112  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  54.62 
 
 
240 aa  135  4e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  38.77 
 
 
236 aa  134  1.9999999999999998e-30  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  51.54 
 
 
251 aa  133  1.9999999999999998e-30  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  52.21 
 
 
237 aa  133  1.9999999999999998e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  53.12 
 
 
255 aa  132  3.9999999999999996e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  50 
 
 
257 aa  131  7.999999999999999e-30  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  40.09 
 
 
239 aa  130  2.0000000000000002e-29  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  50.81 
 
 
253 aa  129  4.0000000000000003e-29  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  51.54 
 
 
237 aa  128  7.000000000000001e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1194  putative response regulator  58.25 
 
 
266 aa  127  1.0000000000000001e-28  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  38.16 
 
 
238 aa  127  1.0000000000000001e-28  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  51.49 
 
 
261 aa  127  2.0000000000000002e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  50.77 
 
 
236 aa  126  3e-28  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  50 
 
 
243 aa  126  3e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  37 
 
 
232 aa  125  7e-28  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  49.62 
 
 
259 aa  125  7e-28  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  50 
 
 
248 aa  124  1e-27  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.190602 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  49.62 
 
 
249 aa  123  2e-27  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal 
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  38.01 
 
 
239 aa  122  4e-27  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0279779 
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  47.69 
 
 
241 aa  122  5e-27  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.0000121276 
 
 
-
 
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  46.67 
 
 
217 aa  122  6e-27  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  45.26 
 
 
249 aa  121  8e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  50 
 
 
247 aa  120  1.9999999999999998e-26  Frankia sp. EAN1pec  Bacteria  normal  normal  0.186762 
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  39.89 
 
 
229 aa  120  1.9999999999999998e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  50 
 
 
250 aa  120  1.9999999999999998e-26  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_1487  two component transcriptional regulator, winged helix family  34.05 
 
 
232 aa  120  1.9999999999999998e-26  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.487145  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  46.15 
 
 
232 aa  119  3e-26  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  46.27 
 
 
232 aa  119  3.9999999999999996e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2351  two component transcriptional regulator, winged helix family  42.71 
 
 
231 aa  119  4.9999999999999996e-26  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.274912  n/a   
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  46.15 
 
 
232 aa  118  7e-26  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  41.8 
 
 
256 aa  118  7.999999999999999e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.0528352 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  49.15 
 
 
250 aa  117  9e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  48.48 
 
 
264 aa  117  9.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  48.03 
 
 
238 aa  117  1.9999999999999998e-25  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  42.31 
 
 
239 aa  117  1.9999999999999998e-25  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  44.23 
 
 
239 aa  117  1.9999999999999998e-25  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  44.23 
 
 
239 aa  117  1.9999999999999998e-25  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  54.08 
 
 
296 aa  117  1.9999999999999998e-25  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  44.23 
 
 
239 aa  116  3e-25  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  37.99 
 
 
258 aa  116  3e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0875  two component transcriptional regulator  46.2 
 
 
242 aa  116  3e-25  Petrotoga mobilis SJ95  Bacteria  decreased coverage  0.000486966  n/a   
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  46.21 
 
 
278 aa  115  3.9999999999999997e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal 
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  46.21 
 
 
257 aa  115  5e-25  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  54.64 
 
 
270 aa  115  5e-25  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  46.21 
 
 
257 aa  115  5e-25  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  46.21 
 
 
257 aa  115  5e-25  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  40 
 
 
230 aa  115  6.9999999999999995e-25  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  48.48 
 
 
243 aa  115  6.9999999999999995e-25  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  41.18 
 
 
236 aa  114  1.0000000000000001e-24  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  38.1 
 
 
234 aa  113  2.0000000000000002e-24  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  46.51 
 
 
267 aa  113  2.0000000000000002e-24  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  44.7 
 
 
255 aa  112  3e-24  Mycobacterium tuberculosis F11  Bacteria  normal  hitchhiker  0.00597919 
 
 
-
 
NC_011831  Cagg_3302  two component transcriptional regulator, winged helix family  34.51 
 
 
231 aa  110  1.0000000000000001e-23  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.000343135 
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  35.59 
 
 
235 aa  110  2.0000000000000002e-23  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_1237  two component transcriptional regulator, winged helix family  34.21 
 
 
232 aa  109  3e-23  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  34.5 
 
 
232 aa  109  3e-23  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7423  two component transcriptional regulator PhoB, winged helix family  38.1 
 
 
234 aa  109  4.0000000000000004e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2339  two component transcriptional regulator  38.94 
 
 
231 aa  108  5e-23  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  35.91 
 
 
241 aa  108  5e-23  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
NC_009654  Mmwyl1_4400  two component transcriptional regulator  36.41 
 
 
236 aa  108  6e-23  Marinomonas sp. MWYL1  Bacteria  normal  0.998417  normal 
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  36.44 
 
 
233 aa  108  6e-23  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  36.12 
 
 
239 aa  108  7.000000000000001e-23  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  36.12 
 
 
234 aa  108  7.000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.809056 
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  37.07 
 
 
235 aa  108  7.000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  34.78 
 
 
231 aa  108  8.000000000000001e-23  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_007413  Ava_1917  two component transcriptional regulator  34.53 
 
 
238 aa  108  9.000000000000001e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.332821 
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  35.53 
 
 
231 aa  107  1e-22  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  37.07 
 
 
235 aa  107  1e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  37.07 
 
 
235 aa  107  1e-22  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  37.07 
 
 
235 aa  107  1e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  37.07 
 
 
235 aa  107  1e-22  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  36.21 
 
 
231 aa  107  1e-22  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  37.07 
 
 
235 aa  107  1e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  37.07 
 
 
235 aa  107  1e-22  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_008025  Dgeo_0130  two component transcriptional regulator  41.18 
 
 
229 aa  107  1e-22  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.848842  normal 
 
 
-
 
NC_008148  Rxyl_2781  two component transcriptional regulator  30.94 
 
 
241 aa  107  1e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  33.93 
 
 
231 aa  107  1e-22  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  33.64 
 
 
225 aa  107  1e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_010506  Swoo_3452  two component transcriptional regulator  35.91 
 
 
229 aa  107  1e-22  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00686704  hitchhiker  0.000158375 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  37.07 
 
 
235 aa  107  1e-22  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  33.19 
 
 
230 aa  107  2e-22  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  37.07 
 
 
235 aa  107  2e-22  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  37.07 
 
 
235 aa  107  2e-22  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_014212  Mesil_0841  two component transcriptional regulator, winged helix family  45.11 
 
 
223 aa  106  2e-22  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2782  two component transcriptional regulator  34.51 
 
 
231 aa  106  2e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.92379  normal 
 
 
-
 
NC_010511  M446_6685  two component transcriptional regulator  38.1 
 
 
234 aa  107  2e-22  Methylobacterium sp. 4-46  Bacteria  normal  0.599421  normal 
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  37.07 
 
 
235 aa  106  2e-22  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  35.65 
 
 
235 aa  106  3e-22  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0960  two component transcriptional regulator  33.48 
 
 
236 aa  106  3e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.0214647 
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  37.71 
 
 
237 aa  106  3e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  35.29 
 
 
237 aa  106  3e-22  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  34.62 
 
 
236 aa  105  4e-22  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  33.33 
 
 
226 aa  105  4e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  36.52 
 
 
229 aa  105  4e-22  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_013174  Jden_1827  two component transcriptional regulator, winged helix family  35.16 
 
 
227 aa  105  5e-22  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  34.5 
 
 
226 aa  105  5e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  33.49 
 
 
236 aa  105  6e-22  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
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